Nocardia farcinica IFM 10152: NFA_28560
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Entry
NFA_28560 CDS
T00207
Name
(GenBank) putative transcriptional regulator
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
NFA_28560
Transcription factors [BR:
nfa03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NFA_28560
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_IclR
HTH_Crp_2
HTH_20
MarR_2
FeoC
Put_DNA-bind_N
Fe_dep_repress
Rrf2
HTH_Tnp_ISL3
TrmB
HTH_12
HTH_AsnC-type
HTH_24
MarR
DprA_WH
DUF977
HTH_28
HTH_9
HTH_23
HTH_27
FaeA
HTH_5
Sigma70_r4
DUF4423
BRCT_3
Motif
Other DBs
NCBI-ProteinID:
BAD57703
NIH_Japan:
nfa28560
UniProt:
Q5YVT8
LinkDB
All DBs
Position
complement(3040278..3041045)
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AA seq
255 aa
AA seq
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MYAEERQQAIATLVGQRGRVSVADLAERYGVTSETVRRDLAVLDRMGLVRRVHGGAVPAA
ALTAIELGTTEREATHTAEKERIAKAALDYLPPTGGSVLFDAGTTTARVAALLPADRELV
GVTNSLPVATRLSGHAGVQLHLLGGRVRGITQAAVGPDTLRVLAGLRVDTAFIGTNALTG
AHGLSTPDVDEAAVKRAMVASAHRVVVVADSSKIGREDFVRFAGIDDIDVLVTDSGIPDS
VRNELTDSGIEVVAA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagaggagcggcagcaggccatcgccacgctcgtcgggcaacgcggtcgcgta
tcggtcgccgacctggccgagcgttacggcgtcaccagcgagaccgtccgccgggacctg
gccgtgctggaccgcatggggctggtgcgtcgggtgcacggtggcgcggtccccgccgcc
gctctcaccgccatcgaactcggcaccaccgagcgcgaggccacgcacaccgcggagaag
gagcgcatcgccaaggcggccctggactacctgcccccgaccggcggcagcgtcctgttc
gacgccggcaccaccacggcgcgcgtcgccgcgctgctgcccgccgaccgtgagctggtc
ggcgtcaccaattcgctgccggtggccacgcggctgagcggccacgccggcgtgcagctg
cacctgctcggcggccgggtccgcggtatcacgcaggccgccgtcgggcccgatacgctg
cgggtgctggccgggctgcgcgtcgacaccgcgttcatcggcaccaacgccctcaccggc
gcccacgggctctcgacccccgacgtcgacgaggcggcggtgaagcgggcgatggtcgcg
agcgcgcaccgcgtggtggtggtcgccgactcctcgaagatcggccgcgaggacttcgtc
cgcttcgccggcatcgacgacatcgacgtcctggtcaccgattccggcatccccgattcg
gtacgcaacgagctgaccgacagcggcatcgaggtggtggcggcatga
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