Nocardia farcinica IFM 10152: NFA_33130
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Entry
NFA_33130 CDS
T00207
Name
(GenBank) putative ABC transporter
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NFA_33130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_33130
Transporters [BR:
nfa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NFA_33130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_16
Zeta_toxin
AAA_33
nSTAND3
AAA
AAA_29
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAD58160
NIH_Japan:
nfa33130
UniProt:
Q5YUI1
LinkDB
All DBs
Position
complement(3513449..3515194)
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AA seq
581 aa
AA seq
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MRRILRLMLLAAGDYRDEFRRTLWCALLGSIVQALAYATLIPILYELSRPEVDITAAWTW
FGVLVACWVVQAGLHYGQLRFEFGRWADVLAATRLRLGDKLRTMPQADLERRAAGDLTTV
MGSNVANATMSSSGMALLFIQMVTVPAVIGVLILAVDWRLGLVLAASLPFAVLFVRRIQQ
ITGAGARRTDAADAAAASRVVEYVQGLPVLRATGQIGSASRRLVETLEEQNAAMSAMQKR
LTWPGLLAAGVVQLCLVAMVALGAALVLELRMSAALLIAVVAAAVRFAEPMSTMANLSAI
FEITDSALERVGAVLDAPALPVGDPRARITGHDLAVEDVHFTYPDGAPVLRGVSFTAPAR
SLTALVGPSGSGKTTVTRMLTRYADPDAGSIRIGGVDLRELDPVEIYRNIAVVFQDVYLF
DDTIRANIAMAAPGATQEQIEAAARAANVHTFVTRLPHGYDTRVGEIGGALSGGERQRIS
IARAILKDAPIVLLDEPTAALDTESEVAVQEAIDALVAEKTVVVIAHRLSTVVAADQILV
LEDGVVAERGTHEELLARQGRYHAMWAAQTRARHWRVTASV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaattctgcggctgatgctgctcgccgccggggactaccgcgacgagttccgc
cgtaccctgtggtgcgcgctgctcgggtcgatcgtgcaggcgctcgcctacgccacgttg
atcccgatcctgtacgagctgagcaggccggaggtcgacatcaccgccgcttggacctgg
ttcggcgtgctggtggcctgctgggtggtccaggcgggtctgcactacgggcagctgcgg
ttcgagttcgggcggtgggccgacgtgctcgccgccacccggttgcggctcggcgacaag
ctgcggaccatgccgcaggccgacctggagcgccgcgccgccggtgacctcaccaccgtc
atgggcagcaacgtcgccaacgcgacgatgagctcgtccgggatggcgttgctgttcatc
cagatggtgaccgtcccggcggtgatcggcgtgctcatcctcgccgtcgactggcggctg
ggtctggtgctcgcggcctcgctgccgttcgcggtgttgttcgtccggcgcatccagcag
atcaccggcgcgggcgcgcgccggaccgacgcggccgacgccgcggccgcgagccgggtg
gtcgagtacgtgcagggcctgccggtgctgcgcgccaccgggcagatcggcagcgcgtcc
cggcgcctggtcgagacgttggaggagcagaacgcggcgatgtcggccatgcagaagcgg
ctgacctggccgggcctgctggccgccggggtggtgcaattgtgtctggtcgcgatggtc
gcgctcggcgcggcgctggtgctcgagctgcggatgtcggcggcgctgctgatcgccgtg
gtcgccgccgccgtgcgattcgccgagcccatgtcgacgatggccaacttgtcggccatc
ttcgagatcaccgactcggcgctggaacgcgtcggtgccgtgctcgacgccccggcgttg
ccggtgggtgacccgcgggcgcgcatcaccggccacgacctcgccgtcgaggatgtgcac
ttcacctatccggacggcgccccggtgctgcgcggagtgtcgttcaccgctcccgcccgc
tcgctgacggccctggtcggcccgtcgggatccggcaagacgacggtgaccaggatgctg
acccggtacgcggaccccgacgcgggcagcatccggatcggaggcgtcgatctgcgcgaa
ctcgacccggtcgagatctaccgcaacatcgcggtggtcttccaggacgtgtacctcttc
gacgacaccatccgggcgaacatcgcgatggccgccccgggcgccacgcaggagcagatc
gaggccgcggcccgcgcggccaacgtgcacaccttcgtgacccggctgccgcacggctac
gacacccgggtcggcgagatcggcggcgcactgtccggcggtgagcgccagcgtatttcg
atcgcccgcgcgatcctcaaggacgcgccgatcgtcctgctggacgagccgaccgccgcg
ctggacaccgagagcgaggtggccgtgcaggaagccatcgacgcactggtcgcggagaag
accgtcgtcgtgatcgcgcaccggctctccaccgtggtggccgcggaccagatcctggtg
ctcgaggacggggtggtggccgagcgcggcacccacgaggagctgctggcgcggcagggg
cgctaccacgccatgtgggcggcgcagacccgcgcccggcactggcgggtcaccgcgtcc
gtctag
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