Nocardia farcinica IFM 10152: NFA_33140
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Entry
NFA_33140 CDS
T00207
Name
(GenBank) putative ABC transporter
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NFA_33140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_33140
Transporters [BR:
nfa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NFA_33140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_29
AAA_22
AAA_30
AAA_25
SRP54
AAA_24
AAA_26
DUF4231
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAD58161
NIH_Japan:
nfa33140
UniProt:
Q5YUI0
LinkDB
All DBs
Position
complement(3515191..3517044)
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AA seq
617 aa
AA seq
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MTMGGTAAELRTDEATPPPSASAESTAVSPGSALFRVTEPVRGRLTASLAIAALGGAAGV
TGFVGTALALGELFDADTRTGTVVAFLVLAAAGFLARFALRAWSFLLSHLASFDLEQRLR
SDLAAHLGRMPLGEAQRLGSGAVKKIVQDDVRGLHMAVADAVPLAGFTLAQPVAALVALG
LVDWRLLLAVALFLPVVFVGMQLSLRDYVETRRRYDEANEAINAATVEFVQGMPVVRTFD
DGTVSFRRFVDRVRQFNFATTNWQNNNRSAMIFANLTVAPLPTIVIVTAVGIWLTSTGSM
SPAQLIAAILIGTLPVESVVPLMNLSNLLNDSKAGAARIVELLDIEPLPEPADPQTPADG
SIEFRSVRFSYPGADRPALDGVDLTIPSGSVCALVGSSGSGKSTVARLIPRFWDVDSGQV
LVGGVDVRQIASQDLLATLAMVFQEPFLLSDTVAENIRLARPSATDAEVEAAARAARAHD
FIVSELPRGYDTQVGERGARLSGGQRQRITIARALLADAPIVVLDEATSFADPENEAAIQ
DAIAELTRGRTVLVVAHRLSTIVDADRIVVLESGRVAESGTHTELLAAGGRYARLWEHHE
RARGWGLGSSTKEAMRR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatgggtggtaccgcagcagagctccgaacggacgaggccacaccgccaccgtcg
gcatccgcggagtcgaccgcggtgtcccccggtagcgcgctgttccgggtgaccgagccg
gtccgcggacggctgaccgcgtcgctggccatcgccgcactgggtggcgcggccggggtg
accgggttcgtgggaacggcactggcgctgggggagttgttcgacgccgacacgcggacc
ggcaccgtggtggccttcctggtgttggccgcggccggattcctcgcccgattcgccctg
cgtgcctggtcgttcctgctctcgcatctggcatcgttcgacctcgagcagcgtctgcgc
agcgatctggccgcacacctgggccggatgccgttgggggaggcgcagcgccttggctcc
ggcgcggtgaagaagatcgtgcaggacgacgtgcgcggcctgcacatggcggtcgccgac
gccgtgccgctggccgggttcaccctggcccagcccgtcgcggcgctggtggcgctgggc
ctggtggactggcggctgctgctggcggtcgcgctgttcctgccggtggtgttcgtcggg
atgcagctcagcctgcgcgactacgtcgagacccgccgccgctacgacgaggccaacgag
gccatcaacgcggccacggtggaattcgtgcagggcatgccggtggtgcggaccttcgac
gacggcacggtctcgttccggcgcttcgtcgaccgggtgcggcagttcaacttcgcgacc
accaactggcagaacaacaaccgcagcgcgatgatcttcgccaacctgacggtcgcgccg
ctgccgaccatcgtgatcgtgaccgcggtcggcatctggctcacctcgaccgggtcgatg
tcgcccgcgcaactgatcgccgcgatcctcatcggcaccctcccggtggaatcggtggtc
ccgttgatgaacctgtccaacctgctcaacgactccaaggcaggcgcagcccgcatcgtc
gaactgctcgacatcgagccgctgccggagcccgcggacccgcagactccggccgacgga
tccatcgaattccgttccgtccgtttctcgtacccgggagcggaccggcccgcgctggac
ggggtggacctgacgatcccgagcggcagtgtgtgcgcgctggtcggctcgtccggctcg
ggcaaatcgacggtcgcccggctcatcccgcggttctgggacgtcgattccgggcaggtc
ctcgtcggcggggtggacgtccggcagatcgcgtcgcaggacctgctcgccaccctggcg
atggtgttccaggagccgttcctgctctccgacaccgtggccgagaacatccggctggcc
cggccgtcggccaccgacgccgaggtcgaggccgccgcgcgggccgcccgcgcccacgac
ttcatcgtctcggaactgccgcgcggctacgacacccaggtcggtgagcggggcgcccgg
ctctccggcgggcagcgccagcgcatcaccatcgcacgtgccctgctcgcggacgcgccg
atcgtcgtcctcgacgaggcgacctccttcgccgacccggagaacgaagcggcgatccag
gacgcgatcgccgaactcacccgcggccgcaccgtgctggtggtggcgcaccggctgtcc
acgatcgtcgacgcggaccgcatcgtggtgctggaatccggccgggtcgccgaatccggc
acgcacaccgaactgctcgccgccggcgggcgctatgcccggctctgggaacaccacgag
cgcgcccgcggatggggtctcggcagctcgaccaaggaggccatgcgccgatga
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