Nocardia farcinica IFM 10152: NFA_33250
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Entry
NFA_33250 CDS
T00207
Name
(GenBank) putative transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
NFA_33250
Transcription factors [BR:
nfa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
NFA_33250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
HTH_31
HEAT_2
Motif
Other DBs
NCBI-ProteinID:
BAD58172
NIH_Japan:
nfa33250
UniProt:
Q5YUG9
LinkDB
All DBs
Position
complement(3526869..3527507)
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AA seq
212 aa
AA seq
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MNARRHGPSAQARRNALLRATVEIVAEQGMAGVTHRAVTERAGLPLATASYFFSSIDELA
KESLLTFMAEEQAAQTATAEQLAAHTMSADEMGRMLAAANRPRLPDWLAYCEALLHAARH
PEFREAAQDALESSWTVARAVVRAVGAPEAEAAAPVLTALAHGLALDQMAVGAVDDDTSY
RAFRALLLGYLLDNGHADLALSLARAGQPAGE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcgccggcacggacccagcgcccaagcccgccgaaatgccttgctgcgcgcg
acggtcgagatcgtcgccgaacagggcatggccggggtgacgcatcgcgcggtgaccgaa
cgggccgggctgccgctggcgacggcgagctacttcttctcctccatcgacgaactcgcc
aaggagtccctgctgaccttcatggccgaagaacaggccgcgcagacggccacggccgaa
cagctggccgcgcacacgatgtcggccgacgagatgggacgcatgctggccgccgccaac
cggccacggctgccggactggctggcctattgcgaagccctgctgcacgccgcgcggcat
cccgaattccgggaggccgcccaggacgcgctggaatcgtcgtggacggtggcccgggcg
gtggtgcgcgcggtcggcgcgcccgaggccgaagcggcggccccggtgctcacggcactg
gcacacgggctggccctcgatcagatggcggtaggcgcggtcgacgacgacacgtcctat
cgggcctttcgcgcgctcctgctcgggtatctgctcgacaacggccacgccgacctcgcg
ctctccctcgcgcgcgccgggcagccggccggtgagtga
DBGET
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