Nocardia farcinica IFM 10152: NFA_36050
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Entry
NFA_36050 CDS
T00207
Name
(GenBank) putative sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfa03021
]
NFA_36050
Transcription machinery [BR:
nfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFA_36050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
MarR_2
KORA
HTH_3
HTH_Tnp_ISL3
HTH_Crp_2
GerE
Sigma70_ECF
DUF7343
HTH_10
HTH_24
DUF134
Motif
Other DBs
NCBI-ProteinID:
BAD58453
NIH_Japan:
nfa36050
UniProt:
Q5YTN8
LinkDB
All DBs
Position
3815634..3816581
Genome browser
AA seq
315 aa
AA seq
DB search
MTGAQKRSGSDRDETIETTPPTGTASGASEPGQAPAEVDVERDEDVEAEQDAEVAAEAVA
EAGSVTGYDDLPDLFDRLAAVEPGTAEHAALRDELISRCVPLADHIARKFSGRGEPFDDL
TQVARVGLVHAVDRFDPARGSNFLSFAVPTIMGEVRRYFRDHTWAMRVPRRVKETHLRIG
AAIDTLSQSLGRSPTAKEIAAELRVDPDEVTQAVIAGNAYQPSSIDAAALGRESDASLLD
TLGEEEAQFERVEEYVAIRPLLAGLPERERRILTMRFFESMTQTQIAKQMGISQMHVSRI
LAKTLARLRELSARE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggcgcgcagaagaggtccggatcggaccgggacgagacgatcgagaccacgccg
cccaccggaaccgcgtcgggggcgagcgagccggggcaggctcccgccgaggtcgacgtc
gagcgcgacgaggacgtcgaggccgagcaggacgcggaggtggcggccgaggcggtcgcc
gaagccgggtcggtgaccggctacgacgatctgcccgacctgttcgatcggctggcggcg
gtcgaaccgggcaccgccgagcacgccgccctgcgcgacgagctcatcagccgctgcgtg
ccgctggccgaccacatcgcccgcaagttcagcggacgcggcgagccgttcgacgacctc
acccaggtggcccgggtgggactcgtgcacgccgtggaccggttcgacccggctcgcggc
tccaacttcctgtccttcgcggtgcccacgatcatgggcgaggtgcgccgctacttccgc
gatcacacctgggcgatgcgggtgccgcgacgggtgaaggagacccacctgcgcatcggc
gcggccatcgacaccctctcccagtcgctgggccgctcccccaccgccaaggagatcgcg
gccgagctgcgtgtcgaccccgacgaggtgacccaggcggtcatcgccggcaacgcctac
cagcccagctccatcgacgccgccgcgctgggccgcgagtccgacgcctccctgctcgac
accctcggcgaggaggaggcgcagttcgagcgcgtcgaggagtacgtggccatccgcccg
ctgctggccgggctgcccgaacgcgaacggcgcatcctcaccatgcgcttcttcgaatcc
atgacccagacccagatcgccaagcagatgggcatctcgcagatgcacgtctcccgcatc
ctggccaagaccctcgcccggctgcgcgaactctccgcccgcgagtga
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integrated database retrieval system
