Nocardia farcinica IFM 10152: NFA_36950
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Entry
NFA_36950 CDS
T00207
Symbol
ruvB
Name
(GenBank) putative Holliday junction DNA helicase A subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NFA_36950 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_36950 (ruvB)
Enzymes [BR:
nfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NFA_36950 (ruvB)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NFA_36950 (ruvB)
RecFOR pathway proteins
NFA_36950 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
AAA_16
nSTAND3
Mg_chelatase
AAA_14
AAA_3
RNA_helicase
Sigma54_activ_2
Resolvase
Zeta_toxin
HTH_AsnC-type
DUF815
TsaE
IstB_IS21
AAA_33
Rad17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAD58543
NIH_Japan:
nfa36950
UniProt:
Q5YTE8
LinkDB
All DBs
Position
complement(3913188..3914261)
Genome browser
AA seq
357 aa
AA seq
DB search
MDDHDDSPVSPSFLKSDGEIEASLRPKSLDDFIGQPRVREQLALVLRGAKQRGSTPDHVL
LSGPPGLGKTSMAMIIAAELGTALRITSGPALERAGDLAAMLSNLVEGDVLFIDEIHRIA
RPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGALTGPLRDRFGFTG
HMDFYEPGELLRILERSAQILGVRIETDAAAEIAGRSRGTPRIANRLLRRVRDYAEVRAD
GIVTLPVARAALEVYDVDTLGLDRLDRAVLDALVRGFHGGPVGVSTLAVAVGEEATTVEE
VCEPFLVRAGLVARTPRGRVATAAAWEHLGLVPPPDLVFGSIEVRGRTSQPTLDLFD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccacgacgattccccggtcagcccgagcttcctgaagtccgacggcgagatc
gaggccagcctgcgcccgaaatccctggacgacttcatcgggcagccgcgcgtgcgcgaa
caactggcgctggtgctgcgcggggccaaacagcgcggcagcacgcccgatcacgtgctg
ctgtccgggccgcccggcctcggcaagaccagcatggcgatgatcatcgccgccgaactc
ggcaccgccctgcgcatcacctccggcccggccctggagcgggcgggcgacctcgccgcc
atgctcagcaacctggtcgagggcgatgtgctgttcatcgacgagatccaccgcatcgcc
cggcccgccgaggagatgctgtacctggcgatggaggacttccgcgtcgacgtcgtggtc
ggcaagggccccggtgccacctcgatcccgctcgacatcgccccgttcacgctggtcggg
gcgaccacccgctccggcgcgctcaccgggccgctgcgtgatcgcttcggcttcaccggg
cacatggacttctacgagcccggtgaactgctgcgcatcctggaacgctcggcccagatc
ctcggcgtgcgcatcgagaccgacgccgccgccgagatcgccggccgctcccggggcacg
ccgcgcatcgccaaccggctgctgcgccgggtccgcgactacgccgaggtgcgcgccgac
ggcatcgtcacactgccggtcgcccgggccgcgctcgaggtctacgacgtggacaccctc
ggcctggaccgcctcgaccgcgcggtgctcgacgcgctggtgcgcggcttccacggtggc
ccggtcggggtgtccacgctggcggtggcggtgggggaggaggccaccaccgtcgaggag
gtgtgcgagcccttcctggtgcgcgccgggctggtggcacgcacgcctcgcggccgggtg
gcgaccgcggcggcctgggaacacctcggtctggtcccaccaccggacctggtgttcggc
tcgatcgaggtgcgcgggaggacatcccagcccaccctcgacctgttcgactga
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