Nocardia farcinica IFM 10152: NFA_37410
Help
Entry
NFA_37410 CDS
T00207
Symbol
dxs
Name
(GenBank) putative 1-deoxy-D-xylulose 5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00730
Thiamine metabolism
nfa00900
Terpenoid backbone biosynthesis
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
Module
nfa_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NFA_37410 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NFA_37410 (dxs)
Enzymes [BR:
nfa01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
NFA_37410 (dxs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
PFOR_II
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAD58589
NIH_Japan:
nfa37410
UniProt:
Q5YTA2
LinkDB
All DBs
Position
complement(3960138..3962033)
Genome browser
AA seq
631 aa
AA seq
DB search
MGVLSRVDTPEDVRRLNVAELRELAEEIREFLVRKVAATGGHLGPNLGVVELTIALHRVF
DSPADPLIFDTGHQAYVHKILTGRKDRFDDLRKQGGLSGYPSRAESPHDWVESSHASAAL
SYADGLAKAFALGGQDRHVVAVVGDGALTGGMCWEALNNIAAAPDRPVVVVVNDNGRSYA
PTIGGLADRLTALRTQPAYEHALDAGKRLLKSIPRVGESAYSMVHAVKAGIKDAVSPQEL
FSDLGLKYVGPVDGHDVVAMESALRRAKDFGGPVVVHAVTQKGRGYEHAENHVADQMHAC
DPIDPLTGRPLGGAKARGWTSVFSEELIEHARRRSDIVAITAAMPGPTGLSAFGERFPDR
MFDVGIAEQHAMASAAGLALGGMHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAG
ITGPDGASHNGMWDLSLLGIIPGIRVAAPRDAATLREELGEALAVTDGPTVLRFPKGSVA
EDLTAVERIDGVDVLRAADPESAVRTQRGDVLIVAVGPFARIGLAAAELLAPEGVSVTVV
DPRWVLPVSDTVVKLAENYRLVVTLEDSGLHGGIGSTVSARLRSVGLDVPTRDLGVPQQF
LDHASRDQVLEQLGLTPTDVARRIAGWLDAR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgggagtgctttcccgggtcgacacacccgaagacgtgcgccggctgaacgtggccgag
ttgcgggagctcgcggaggagatccgcgagttcctggtgcgcaaggtcgcggcgaccggc
ggtcacctcggaccgaacctcggcgtcgtcgagctgaccatcgcgctgcaccgggtgttc
gactctccggccgacccgttgatcttcgacaccggccaccaggcctacgtccacaagatc
ctcaccggccgcaaggaccggttcgacgacctgcgcaagcagggcgggctgtccggctac
cccagccgcgccgagagcccccacgactgggtcgagtcctcgcacgcctccgcggcgctg
tcctacgccgacggcctggccaaggcgttcgccctgggcgggcaggaccggcacgtggtc
gccgtcgtcggcgacggcgcgctcaccggcggcatgtgctgggaggcgctgaacaacatc
gccgcggccccggatcgcccggtggtcgtggtggtcaacgacaacggccgctcctacgct
cccaccatcggtgggctggccgatcggctgaccgcactgcgcacccagcccgcctacgag
cacgcgctcgacgcgggcaagcggctgctcaagagcattccgcgggtgggggagtcggcg
tattcgatggtgcacgcggtcaaggcgggcatcaaggacgcggtgagcccgcaggaactc
ttcagcgatctcggcctgaagtacgtgggcccggtcgacgggcacgacgtggtggcgatg
gagtcggcgctgcgccgcgccaaggacttcggcggaccggtggtcgtgcacgcggtcacc
cagaagggccgcggctacgagcacgccgagaaccacgtcgccgatcagatgcacgcctgt
gacccgatcgacccgctcaccgggcggccgctgggcggggccaaggcgcgcggctggacc
tcggtgttctccgaggaactgatcgagcacgcgcgccggcgctccgacatcgtcgccatc
accgccgcgatgccaggcccgaccgggttgtccgccttcggcgagcgtttcccggaccgc
atgttcgacgtgggcatcgccgaacagcacgcgatggcctccgcggcggggctggcgctg
ggcggtatgcacccggtggtcgcgatctactcgaccttcctcaaccgcgccttcgaccag
ctgctcatggatgtggcgctgttgaagcagccggtgacggtggtgctggaccgcgcgggc
atcaccggcccggacggcgccagccacaacggcatgtgggatctgtcgctgctcggcatc
atccccggcatccgggtcgccgcgccgcgcgatgccgccaccctgcgcgaggaactcggg
gaggcgctggccgtcaccgacgggccgaccgtgttgcggttcccgaaaggcagtgtcgcc
gaagacctcaccgcggtggagcggatcgacggtgtggacgtgctgcgcgcggccgacccc
gagtcggcggtgcgcacccagcgcggtgacgtgctgatcgtcgcggtcggcccgttcgcc
cggatcgggctcgcggccgccgagctgctcgctccggaaggggtgtcggtcaccgtcgtc
gatccccgctgggtgctgccggtctccgacaccgtggtcaagctcgcggagaactaccgg
ctcgtggtcaccctggaggacagcggcctgcacggcggcatcgggtccacggtgtcggcg
cggctgcggtcggtcggcctggacgtgccgacccgcgacctcggcgtcccgcagcagttc
ctcgaccacgcttcccgcgaccaggtgctcgagcagctcgggctcacccccaccgacgtc
gcccggcgcatcgcgggctggctcgacgcccgctga
DBGET
integrated database retrieval system
