KEGG   Nocardia farcinica IFM 10152: NFA_38290
Entry
NFA_38290         CDS       T00207                                 
Symbol
dapF
Name
(GenBank) putative diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nfa  Nocardia farcinica IFM 10152
Pathway
nfa00300  Lysine biosynthesis
nfa00470  D-Amino acid metabolism
nfa01100  Metabolic pathways
nfa01110  Biosynthesis of secondary metabolites
nfa01120  Microbial metabolism in diverse environments
nfa01230  Biosynthesis of amino acids
Module
nfa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NFA_38290 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NFA_38290 (dapF)
Enzymes [BR:nfa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NFA_38290 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: BAD58677
NIH_Japan: nfa38290
UniProt: Q5YT14
LinkDB
Position
complement(4049104..4050012)
AA seq 302 aa
MTDIGGTDIEFTKGHGTENDFVVLPDEDVRLDLTPARVAALCDRQRGLGADGVLRVARAG
ALLRAGVLDALPAGVSDTDWFMDYRNADGSIAEMCGNGVRVFAHYLAATGRAEGTEHVVG
SRAGARPVTVHAAGPTHGEVTVAMGEVRALGASTATVAGWGYSGLGIDVGNPHLACVDPT
LTAEALAKLDLTVSPGYDPDLFPHGVNVEILTPLDEQRAVDMRVYERGVGETRSCGTGTV
AAAAAALSAEGFELATGSGAVTVRVPGGAVRVGLEAGSAWLRGPSVLVATGRLTADWWQT
LG
NT seq 909 nt   +upstreamnt  +downstreamnt
gtgacggacatcggcgggacggacatcgagttcacgaagggccacggcaccgagaacgac
ttcgtcgtgctgcccgacgaggacgtccggctcgacctgacgcccgcgcgggtggccgcg
ctctgcgaccggcagcgcggcctcggcgcggacggggtgctgcgggtggcgcgcgccggt
gcgctgctgcgcgcgggcgtgctcgacgcgttgcccgccggggtgtccgacaccgactgg
ttcatggactaccgcaacgccgacggatcgatcgcggagatgtgcggcaacggcgtgcgg
gtcttcgcccactatctggccgccaccggacgtgcggagggcaccgagcacgtggtaggc
agccgggcgggcgcgcggccggtgaccgtgcacgcggcaggcccgacccacggcgaggtc
accgtggcgatgggggaggtccgtgcgctgggcgcctccaccgcgaccgtcgccggctgg
ggctactccggtctcggtatcgatgtcgggaatccgcacctggcgtgcgtggaccccaca
ctcaccgcggaggcgctggccaagctggacctgaccgtctcgcccggctacgaccccgac
ctgttcccgcacggggtgaacgtcgagatcctgaccccgctcgacgagcagcgcgcggtg
gacatgcgcgtctacgagcgcggcgtcggcgaaacccggtcgtgcggaacgggaaccgtg
gcggcggcggccgcggccctgagtgccgagggcttcgagctggccaccggcagcggggcg
gtcacggtacgggtgcccggcggcgcggtgcgggtcgggctggaggcgggctcggcgtgg
ctgcgcggtccgtcggtgctggtcgcgaccggtcgcctcacggcggactggtggcagacg
ctcggatga

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