Nocardia farcinica IFM 10152: NFA_39130
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Entry
NFA_39130 CDS
T00207
Name
(GenBank) putative phage tail
Organism
nfa
Nocardia farcinica IFM 10152
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GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
BAD58761
NIH_Japan:
nfa39130
UniProt:
Q5YST0
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All DBs
Position
complement(4117916..4123306)
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AA seq
1796 aa
AA seq
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MPIPRTDLPSAPNLRAHTFIGGVHMADWPAYKAGSARITLRPQLAATFKADVKALLKPID
ESLTVTVKPQLMRGFKADLREKIKTAAAGIDQKVTFSPKLAAGFKTSLKTSITTATKDYT
PAVAFAPTLTATFKADLAAAVETEIAQQTAFSVEFAPKLRQGFTADLKMAVGGVKSKLRD
ESLIEFRPGLAKGFRADLKGKLETSTGTLRPKVPVDADLTQATAQLEAFRIAQAAVPLTM
NVNVDTAAAVAQLLALRSLASAVGQETSGLGSGALAGARRRLRGNIFTRPIRAIRLQIEL
DKASVARAEAEVANVRSRLEQSQRSHGDAVDRTRLAQQRYNEVMARSSATESQRTAALQR
LTRARRDEADALGRVTGLMNQQRDADERLNRARRDRNSFSRLIGAGLSGLGSAIGDAARH
MLSFSNLTNLATIGLIALAAVNLIPLIGQLSQALGVIGLIPAALTGAVAVIGTLVVGSRG
IGDAFSAAGKAAESAGKDAETRAKAVATAQKQQASAAKQVEQASRGIESAEKGVRQAQKH
TLQAQKDLNRAREQAKDDIDDLNRALGRTALTEESAALAVAEAQRELFRTFMDPDSDAID
RARAQNSVKQALADQQDTIRENQRLAEQAAEANRKGVEGSDEVVAAKERVVDAIDAENEA
RQSLADAHATLADAQAAYAEASQAVTDAMNESSDAADEYEKALGKLSPAARAFVEQMIAL
KGSYGELRRLVQEKLFDQLGVSVSNLATNWLPTLREGLGGIAAEINSGVRRALADLDTEA
SRNKLATIFDNVAKSIGPLINGLENLLQGFLSLSEVGSGFMPSGAQGFENITKRFRDWAE
SPKGKQQFHDFLDESIRTFGKIMEIGGRLVDLFKNLFRGSDEAGEDWLDSISNTLTKWNE
FLSSEEGQQKLKDFFNGAKDFADKLYKAAEKIIELIDRVDGWNLDEKFSSGPLAGVLGLF
DEDKSTGEKVGGYAKGMWNAGVTNSPAGWVVRGVLAWDKAAIDTAKDAFNSFSDTIDDKA
GSVVGWFYDMGTSASDWASDAKDSFTGSGGALSEFTNMLPDVRTELGEFKDDASDKFNTF
KSTVETVFTTLTGPEVLGKFKNELSTLPGFFDGLVLGIGHAWSNVTTALRGPINSVIDVL
NGFGDIWNRVAKKLGLPEWEPIDHVGEVGQSGTFDKPLVGARAMGGPGGPVHGPGNGRDD
KAGLYRLSRGEHVWTADEVRAAGGHEAMYRMRRTVLKGGGTQAKPDGPLPGYADGGIVQT
SDPMDPIQVHLWDLVRNAIPGAILTSAKRFVDVGSGYDLHMQGKAIDLGGPMKEIARWIY
TTYPQSAELIHWPLDGWQNLDEGRPFDFGSGTNEQHRDHVHWAANDFLTEMSEDDKRSLF
DRVRQGVGGLVSSGRSLMIDNLLAKPLRGLADQVPVFDQLGEFGQMPRAFARKMADTVIN
WVTSKMGGETGGSVVDYDPAWGVEHWREMAKEAMRRVGFNADDENQVNAMLAQIKSESGG
NPNIAQQIVDVNGTGEAAGVGLLQIIPGTYEAYRDPELPNNRRDPFSNMVAALRYYKARY
GMDLTTMWGKGHGYDQGGIFPHGTWGFNASGLPEAVLTNPQWKLFEQFIRQMPGMEQKLQ
ALPQPVPGQMAPLPQPMNGGTSADGTPGTYGVPVNPGVDTLEMVGNKARERYTSALKTGF
DGLISSTLDPLGLPDPRSLIPSEVTEYGKTLDAWHQARIASAQASGALAQSGYQAAPAPA
ATANQVVQSGGSGTELATYDYSTHITIQTRDVDEGFRKAQQIADLRAIQHTGTARG
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
gtgcccataccgcggactgatcttccttccgcgccgaatttgcgcgctcacaccttcata
ggcggtgtccatatggcggattggcctgcatacaaggctggctcggccaggatcactctg
cgcccccaactcgcggccacgttcaaagcggacgtcaaggcacttctgaagccgatcgac
gagtctctgacggtcacggtgaaaccgcagctcatgcgcggcttcaaagccgaccttcgc
gagaagatcaagaccgcagccgcgggcatcgaccagaaggtcaccttctccccgaagctg
gctgccggcttcaaaaccagcctgaaaaccagcatcaccactgcgaccaaggactacacc
ccggccgttgccttcgcgcccacgctgacggctaccttcaaggctgacctcgccgctgcg
gtcgagacagagatcgcccaacagaccgccttctccgtcgaattcgcgccgaagctgcgc
caaggcttcaccgccgacctgaagatggcggtcggtggcgtcaagtccaagctccgcgac
gaatcgctgattgagttccgtcccggtctcgccaagggcttccgggcggacctcaagggc
aagctcgaaacctcgaccggcacgctgcgcccgaaagtccccgtcgacgcagacctgacg
caggcgaccgcgcagcttgaggcgttccgaattgcgcaggccgccgtcccgttgacgatg
aacgtcaatgtcgacaccgccgccgcagtcgctcagctgctggctctgcgctctctggcg
tccgcggtcggccaggaaacctccggtctcggcagcggcgcgctggcaggtgccaggcgt
cgcctgcgcggcaacatcttcacccgcccgatccgcgctatccgactgcaaatcgaactc
gacaaggcatcggtggcgcgcgcggaggcggaggtcgccaacgtccgctcccgactggag
cagtcgcagcggtcccacggtgacgctgtcgaccggactcgcctggcgcaacagcgatac
aacgaggtgatggcacggtcgtccgcgaccgagtcgcaacggaccgccgccctacagcgg
ctcacccgcgcccgccgcgatgaagccgatgcgctcggccgcgtcaccggcctgatgaat
cagcagcgcgacgccgacgagcgcttgaatcgtgcccgccgagaccgcaactcattcagc
cgccttatcggcgcgggcctgtccgggctcgggtcggcgatcggtgacgccgcacgccac
atgctgtcgttcagcaacctcaccaacctcgccaccatcggcctgatcgcgctcgcagca
gtaaacctgatcccgctgatcgggcagctgtcgcaagccctcggcgtcatcgggttgatc
cccgccgctcttactggcgctgtggccgtcatcggcacattggttgtggggtctcggggg
atcggtgacgcgttctctgcggcaggcaaggccgcggaatcggcaggcaaggacgccgaa
acacgcgctaaggcggtcgccactgcgcagaagcagcaggcgtcggcggcaaagcaggtg
gagcaggccagccgcgggatcgagtcggcggagaagggcgtccggcaggctcagaagcac
acgctccaagctcagaaggatctgaaccgggcgcgtgagcaggcgaaggacgacatcgac
gacctgaaccgggcgttgggtcgtaccgcgttgacggaggagtcggcagcgcttgcggtc
gcggaagctcagcgtgagctgttccggaccttcatggatccggactcggacgcgatcgac
cgtgcccgcgcgcagaattcggtgaagcaggcgcttgctgaccagcaggacacgattcgc
gagaaccagcggctcgccgagcaggcagccgaggcgaaccggaagggcgtcgaaggctcc
gacgaagtcgtcgccgcgaaggaacgtgtcgttgacgcgatcgacgccgagaacgaggcc
cggcagtctcttgcggacgcgcacgcgactctggccgacgcgcaggccgcctatgcggag
gcttctcaggctgtcacggacgcgatgaacgaatcgtctgacgcggctgacgagtacgag
aaggctctcggaaagctgtcaccggcggcgcgggcgttcgtcgagcagatgattgcgctc
aagggctcctatggtgagcttcgtcggctggtgcaggagaagctgttcgatcagctcggc
gtctcggtgtcgaatctggcgacgaattggcttccgacgctccgcgaggggctcggcggc
atcgccgcggagatcaacagcggtgtgcgtcgcgcgctcgcggacctggatactgaggcg
tcgcggaacaagcttgccacgatcttcgacaacgtagccaagtccatcggacctctgatc
aatggcctggagaacctgctgcaagggttcctgtcgctgtctgaggtcgggtccggtttc
atgccctcgggcgcgcaggggttcgagaacatcaccaaacggttccgcgattgggctgaa
tcgccgaaaggtaagcagcagttccacgacttcctcgacgagtcgatccgaaccttcgga
aagatcatggagatcggcggccggctcgtcgatctgttcaagaacctcttcaggggttcg
gacgaggcaggcgaggactggctcgacagcatctccaatacgctgacgaagtggaacgag
tttctgtcctcggaggagggacagcagaagctcaaggacttcttcaacggggcaaaggac
ttcgccgacaagctgtacaaagctgcggagaagatcatcgagctgatcgaccgcgttgat
ggctggaatctcgacgagaaattcagtagcgggccgcttgccggcgtcctggggcttttc
gatgaggacaagtcgacgggcgagaaggtcggcggctacgcgaagggcatgtggaacgcg
ggcgtgaccaacagtcccgcgggctgggtcgtccggggagtcctcgcgtgggataaggcc
gcgatcgacacagctaaggacgccttcaacagcttctccgacacgatcgacgacaaggct
ggcagtgtcgtcggctggttctatgacatgggaaccagcgcctccgattgggcgagcgac
gcgaaggactccttcactggttctggtggcgcgctgagcgagttcaccaacatgctgccc
gacgtccgcaccgagttgggcgagttcaaagatgacgccagcgacaagttcaacacgttc
aagagcactgtcgagacagttttcactacgctgaccggcccggaagtgctcggcaaattc
aagaacgagctgagtacgctgccaggcttcttcgacggtctggtgctcggtatcgggcac
gcctggtcgaatgtgaccactgctctgcgcgggccgatcaactcggtgatcgacgtcctg
aatggcttcggcgacatctggaaccgggtggccaagaagctgggcttgcctgagtgggag
ccgatcgatcacgtcggcgaagtcggccagagcggcacgttcgataagccgctggtgggc
gcccgagcgatgggcggtcctggtggcccggttcatggccccggcaacggccgcgacgac
aaggctggtctgtatcggctgtcacgtggcgagcatgtgtggaccgcggacgaggtgcgt
gctgctggcgggcacgaggcgatgtaccggatgcgtcggacagtgctcaagggcggcggc
acccaggcaaagcctgatggcccgctgcctggttacgcggatggcggcatcgtccagacc
agtgatccgatggacccgatccaggtgcatctgtgggatttggtgcgcaacgcgatccct
ggcgcgatccttacctcggcgaagcgcttcgtggatgtcgggtccggctacgacctgcac
atgcagggcaaggccatcgacctcggcggcccgatgaaggagattgcccgctggatctac
accacctacccgcagtcggcggagctgattcactggccgctcgacggctggcagaacctg
gatgaaggccggcccttcgatttcgggtcgggaacgaacgagcagcatcgcgaccatgtc
cattgggccgcgaacgatttcctgaccgaaatgtcggaggacgacaagaggtcgctgttc
gatcgggtccggcagggtgtcggcgggctggtgtcgagtggccgcagcctgatgatcgac
aacctgttggcgaagccgctgcgcggcctcgccgaccaggtgccggtgttcgaccagttg
ggcgagttcgggcagatgccaagggcgttcgcccgcaagatggccgacactgtcatcaac
tgggtgacctccaagatggggggcgaaaccggcggcagcgtcgtcgactacgacccggcg
tggggtgttgagcactggcgggagatggcgaaagaagccatgcgccgggtcgggttcaac
gccgacgacgaaaaccaagtcaacgcgatgctggcgcagatcaagtcggagtccggcggt
aacccgaatatcgctcagcagatcgtggacgtcaacggcaccggcgaagccgcgggggtc
ggcctgttgcagatcatcccgggcacgtatgaggcataccgggatccggagctgccgaac
aatcgccgcgaccccttcagcaacatggtcgcggcgttgcgctactacaaagcgcggtac
ggcatggacctcaccaccatgtggggcaagggccatggttacgaccagggcggcatcttc
ccgcacggcacatggggattcaacgcctccggcctgcccgaggcagtgctcacgaaccct
cagtggaagctcttcgagcagttcattcggcagatgccgggcatggagcagaagctgcaa
gccctgccgcagccggtaccgggccagatggcgccgctgccgcagccgatgaacggcggc
acctccgccgacggcacgcccggaacctatggggtgcctgtcaatcctggagtcgacacc
ctggaaatggttggcaacaaggcccgcgagcggtacaccagcgcgctcaagacggggttc
gacggtctgatttcctcgacgctggatccgctcggtcttcccgacccgcggagcctgatc
ccgtccgaggtgactgagtacggcaagaccctggatgcctggcatcaggcgcgtatcgcg
tccgcgcaggcttcgggcgcgctcgcccagtccggataccaggcggcgccggcaccggcc
gcgaccgcgaatcaggtggtccagtctggcggctccggcaccgagttggcgacctacgac
tactccacccacatcacgatccagacgcgcgacgttgatgaggggttccggaaggcgcag
caaatcgctgacttgcgcgctatccagcacactggcactgcaaggggctaa
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