Nocardia farcinica IFM 10152: NFA_40370
Help
Entry
NFA_40370 CDS
T00207
Name
(GenBank) hypothetical protein
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00270
Cysteine and methionine metabolism
nfa01100
Metabolic pathways
Module
nfa_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NFA_40370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
NFA_40370
03032 DNA replication proteins [BR:
nfa03032
]
NFA_40370
03036 Chromosome and associated proteins [BR:
nfa03036
]
NFA_40370
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nfa02048
]
NFA_40370
Enzymes [BR:
nfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
NFA_40370
Transcription factors [BR:
nfa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
NFA_40370
DNA replication proteins [BR:
nfa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
NFA_40370
Chromosome and associated proteins [BR:
nfa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
NFA_40370
Prokaryotic defense system [BR:
nfa02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
NFA_40370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BAD58885
NIH_Japan:
nfa40370
UniProt:
Q5YSF6
LinkDB
All DBs
Position
complement(4187226..4189004)
Genome browser
AA seq
592 aa
AA seq
DB search
MNRTAEHRPAKRRRRFRHDDPVAVDLFSGFGGLTQGIELAGFTTIMAANHRRYKVEVHEA
NHPHAEHWIADLVDPESADYHSARDLPAADLLVAGVSCVNHSQANTQKAYEQGASLFDLE
DPEFDARVTRSERDRATANCVLHYADQHRPRMILVECTTELTSWGPAIPGKPKIGDGSTY
RWWLRQFGNLGYDHKVLYLNSMFFGVPQSRDRLYIVFWDRRMPAPDLEHRPLTWCGSCDD
TVEAVWSWKTGVPLSGSVRYGKQYNYRCPRCRREIVPPMTPSLYALDLSNLGVRIGDRPL
KKFKVGDTEVLSPLAPATMARAERCRKRFADFPAILLPAKAVRGTERHPWQPMATQTSQQ
ETAILSTGSVIAAHRHNGDGKHLTLPMDTVTSTYEKALLFAAVNNFQGSPRATAEPLPTQ
AGSETLGLVSSGILPFRKNTRPTTHTEAMPTVTSEQIPGLLTAAGVIKNNGNISEAKYRA
HPVSDPFGTIVSSASQSVMFSGWIDHAEWRAALADLALEDCYFRMLGPHEVGRGCGFDTD
FPNHKGTFIVWGAARDQVDGFGNAVSPNVGAWIGIRLRAAFHKGTTSLGATA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcacagcagaacaccggcccgcgaaacggcgccgccggttccgacatgacgac
cccgtcgcggtcgacctgttctccgggttcggtggactgacccagggcatcgagttggcc
ggattcaccacgatcatggccgcgaaccacaggcggtacaaagtcgaggtccacgaggcg
aaccacccgcacgccgaacactggatcgccgatctggtcgaccccgagtccgccgactac
cactcggctcgggatctgcccgccgcggacctgctggtggcgggggtgtcgtgcgtgaac
cattcgcaggccaatacgcagaaggcgtacgagcagggtgcgtcgctgttcgacctggaa
gaccccgagttcgatgcacgcgtgacgcggtcggagcgggaccgggcgaccgcgaattgc
gtgctgcattacgccgatcagcatcggccgcggatgatcctggtcgagtgcactaccgag
ctgacgtcgtggggtccggcgataccgggtaagccgaagatcggggacggctcgacctac
cggtggtggttgcgccagttcggcaacctcggctacgaccacaaggtgctgtacctgaac
agcatgttcttcggagtgccccagagccgggaccgcctgtacatcgtgttctgggatcga
cggatgcccgccccggacttggagcatcgcccgctgacgtggtgcggcagctgtgacgac
acggtcgaggcggtgtggtcgtggaagaccggggtgccgctgtcgggctcggtgcggtac
gggaagcagtacaactaccggtgcccgcgctgccgccgcgaaatcgtgccgccgatgacg
ccgtcgctgtacgcgctcgacctgtccaacctgggcgtccgcatcggggatcggccgctg
aagaagttcaaggtcggtgacacggaagtgttgagcccgctggcgccggcgacgatggca
cgggccgagcggtgccgtaagcggttcgctgacttcccggcgatcctgctgccggcgaag
gcggtccgcggcacggagcggcacccgtggcagccgatggcgacgcagaccagccagcag
gagaccgccatcctgtcgaccgggtcggtaatcgcggcgcaccgccacaacggtgacggc
aagcacctcactctgccaatggacaccgtcacctccacgtacgagaaggcgctgctgttc
gcggcggtgaacaacttccaaggtagcccgcgggcgacagcggaaccgcttccgacacag
gccggttcggaaacgctgggtctcgtgtcgtcggggattctgccgttccgcaagaacacc
cgaccgaccacacacaccgaggcgatgccgaccgtcacctccgaacagatcccgggcctg
ctcaccgccgccggagtgatcaaaaacaacggcaacatcagcgaagcgaagtaccgggcg
caccccgtcagcgacccgttcggcaccatcgtctcctccgcctcgcagtcggtgatgttc
tccggctggatcgaccacgctgaatggcgcgccgccctcgccgacctggcgttggaagac
tgctacttccgcatgctcggaccgcacgaggtcggacgcggctgcggcttcgacaccgac
ttccccaaccacaaaggcaccttcatcgtgtggggcgccgcccgcgaccaagtcgacgga
ttcggcaacgcggtatcacccaacgtgggcgcctggatcggcatccgcctgcgcgccgcc
ttccacaaaggcaccaccagtctcggagccacagcatga
DBGET
integrated database retrieval system
