Nocardia farcinica IFM 10152: NFA_40450
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Entry
NFA_40450 CDS
T00207
Name
(GenBank) putative phage recombinase
KO
K07455
recombination protein RecT
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_40450
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NFA_40450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecT
Motif
Other DBs
NCBI-ProteinID:
BAD58893
NIH_Japan:
nfa40450
UniProt:
Q5YSE8
LinkDB
All DBs
Position
complement(4193574..4194461)
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AA seq
295 aa
AA seq
DB search
MARNLVDRIEQNAPAKNDDLKAAIQKMEKAFALAMPKGAEATQLIRDAFTAIQRTPKLAQ
CEQLSVLGAFMTCAQLGLRPGVLGQAYVLPFWDRKDRMYKAQFVAGYRGLVDLAYRSDRV
LSVSARIVHANDYFELEYNAVEDRLVHRPYLDGARGEARLYYAAGRTRGGGSAITDPVTV
ADMLKYRDRYATAKNKEGKVFGPWVDEFDGMAKKTMIRQLSKMLPMSTELTLAVENDGSV
RFDLGKDAIESPQRLEPDVIDAEAVATSDVQDAPADYYEDVPPAAEGGMFAPEGE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatctcgtcgaccgcatcgaacaaaatgcgcccgccaagaacgatgatctg
aaggccgccatccagaagatggagaaggcgtttgcgctggcgatgccgaaaggcgccgaa
gcgacacagctgatccgcgacgccttcacggcgattcagcgcacccccaagctcgcccaa
tgcgaacagctcagcgtcctcggtgcgttcatgacgtgcgcccaactcgggctccgcccg
ggggttctcgggcaggcgtacgtgctgccgttctgggaccgcaaggatcgcatgtacaag
gcgcaattcgtggctgggtaccgcgggctggtcgacttggcctaccgctctgaccgcgtc
ctgtcggtctcggcgcgaatcgtgcacgcgaacgactacttcgaactggagtacaacgcg
gtcgaagacaggcttgtgcatcggccgtacctcgacggcgctcgcggggaagcacggctg
tactacgccgccggtcggacccgcggcggcggttcggcaatcaccgatccggtcactgtc
gccgacatgctcaagtaccgcgaccggtacgccacggccaagaacaaggaaggcaaggtt
ttcggcccgtgggtcgacgagttcgacgggatggccaagaagacgatgatccggcagctg
tcgaagatgctgccgatgtccaccgaactcaccctcgcagtggagaacgacgggtcggtc
cggttcgatctcggcaaggacgcgatcgaatccccgcagcgtctcgaaccggacgtgatc
gacgccgaagctgtcgcaaccagtgatgtgcaggacgcgcccgcggactactacgaggac
gtgccgcccgctgcggagggcggcatgttcgcgcccgagggggagtag
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