Nocardia farcinica IFM 10152: NFA_40570
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Entry
NFA_40570 CDS
T00207
Name
(GenBank) putative heat shock protein
KO
K04043
molecular chaperone DnaK
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFA_40570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfa03019
]
NFA_40570
03110 Chaperones and folding catalysts [BR:
nfa03110
]
NFA_40570
03029 Mitochondrial biogenesis [BR:
nfa03029
]
NFA_40570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfa04147
]
NFA_40570
Messenger RNA biogenesis [BR:
nfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NFA_40570
Chaperones and folding catalysts [BR:
nfa03110
]
Heat shock proteins
HSP70 / DNAK
NFA_40570
Mitochondrial biogenesis [BR:
nfa03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
NFA_40570
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
NFA_40570
Exosome [BR:
nfa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NFA_40570
Exosomal proteins of breast cancer cells
NFA_40570
Exosomal proteins of colorectal cancer cells
NFA_40570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
Motif
Other DBs
NCBI-ProteinID:
BAD58905
NIH_Japan:
nfa40570
UniProt:
Q5YSD6
LinkDB
All DBs
Position
complement(4204514..4206196)
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AA seq
560 aa
AA seq
DB search
MGVFGIDLGTTNSAIARIDADGRPDVLTGLHGEPTVPSVVLFASPFDHLVGEGARRQARL
DPEHVCALVKRRMGDADWRFAAHGQLWSAPAVSALILESLAADAEFACGEPVRRAVITVP
AYFGDEERKATIQAGTYAGFDVAGVLSEPIAAAFSYGFGRLDGSVDVGKAGTRETVLVYD
LGGGTFDATVIELADRRISVLAVEGDHQLGGADWDERIALHLSQRFCAANPDAEDPLDDS
AGSQMLVLAAERAKRELSEAESTEVVVAHDGARAVVTLTRAEVEAMTASLMRRTLDLTRD
CLAEAAKRGVARVDRLLLVGGSSRMPMVARELRREFGLDGELRDPDLSVARGAALYGEKL
EMERLVVADLVTRGRLRDGGSVSEAAPGDLEQSVSRVAASFGQPVSVVRRMLEIQVDTVV
SRGFGVLALDSHYGLAAAWLVHRNQTLPVRVRRSFGTVRDDQDQIELTIVEQQGQAESVR
PEDTKVLVEGRIRGIPPGYPAGSEVRVTFEMGFDGVLHVTAYHVEADMPLTLSAQTGATL
SQADVARELEQVQRSRRRDS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcttcggcatcgacctgggcacgaccaactcggcaatcgcacggatcgacgcc
gacggtcgacccgacgtactcacgggcctgcacggcgaaccgacggtgccgtcggtcgtc
ctcttcgcctcgcccttcgaccatctcgtcggggaaggcgcgcgtcgtcaggcccggctc
gaccccgagcacgtgtgcgcgctggtgaaacgccgcatgggcgacgcggactggcggttc
gccgcgcacggccagctgtggtcggcgccggcggtctccgcgctgatcctcgagagcctc
gccgccgacgccgagttcgcctgcggcgagccggtgcggcgcgcggtgatcacggtgccc
gcctacttcggcgacgaggaacgcaaggccaccatccaggcgggcacctacgcgggcttc
gacgtcgccggggtgctgtcggagcccatcgcggcggcattctcctacgggttcggcaga
ctcgacggcagtgtcgacgtcggtaaggcaggcaccagggagaccgtgctggtctacgac
ctgggcggtggcaccttcgacgccaccgtcatcgagctggccgaccgccgtatctcggtc
ctcgcggtcgagggcgaccaccagctcggcggcgccgactgggacgagcgcatcgccctg
cacctgtcccagcgcttctgcgcggccaacccggacgccgaggacccgctcgacgattcg
gccggatcccagatgctggtgctggccgccgagcgggcgaaacgcgaactcagcgaggcc
gagagcaccgaggtcgtggtggcgcacgacggcgcccgcgcggtggtcaccctcacccgc
gccgaggtggaggcgatgaccgcctcgctgatgcgccgcacactcgacctgacccgcgac
tgcctggccgaggccgccaaacgcggtgtcgcgcgggtcgaccggctgctgctggtcggc
gggtcgtcgcggatgccgatggtggcgcgcgagctgcgccgggagttcgggctcgacggc
gaactgcgcgacccggatctgtcggtggcccgtggcgcggcgctctacggcgagaagctg
gagatggagcggctcgtcgtggccgacctggtcacccgcgggcggctgcgcgacggcggc
tcggtgtcggaagccgcgccgggcgatctggaacagtcggtttcccgcgtggcggcctcg
ttcgggcagccggtgagcgtggtgcggcggatgctcgagatccaggtcgacaccgtggtc
tcgcgcggtttcggcgtgttggcgctcgattcgcactacggcctggccgccgcctggttg
gtccatcgcaaccagaccctgccggtgcgggtgcgccgctcgttcggcaccgtgcgcgac
gaccaggaccagatcgagctgaccatcgtcgaacagcagggccaggccgaatcggtgcgg
ccggaggacacgaaggtgctcgtggagggccgtatccgcgggataccgcccggctatccg
gccggcagcgaggtgcgggtgaccttcgagatgggcttcgacggggtgctgcacgtgacc
gcctaccacgtggaggccgacatgccgctgacgctgtcggcgcagaccggcgccacgctc
tcgcaggccgatgtcgctcgcgaactcgagcaggtgcagcgttcccggcggcgcgacagc
tag
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