Nocardia farcinica IFM 10152: NFA_40630
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Entry
NFA_40630 CDS
T00207
Symbol
dinF
Name
(GenBank) putative DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_40630 (dinF)
Transporters [BR:
nfa02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
NFA_40630 (dinF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
BAD58911
NIH_Japan:
nfa40630
UniProt:
Q5YSD0
LinkDB
All DBs
Position
complement(4210769..4212118)
Genome browser
AA seq
449 aa
AA seq
DB search
MSADPAAAGPRRILGLALPTLGVLVAEPLYLLFDLAVVGRLGALALAGLAVGGLILAQVS
TQLTFLSYGTTARSARRHGAGDRPGAVAEGVQATWLAVAVGGLILVVMQAAAGPVTAAIS
GGGDIAAEALPWLRIALFGVPLILIAMAGNGWLRGVQDTRRPLVFVVCGLGLSAVLCPVL
VHGLLGAPRLELAGSAVANVAGQTVTAALFVTAVVRERVPLTPHWSVMRAQLVLGRDLIL
RSLSFQACFVSAAAVAARFGAASVAAHQLVLQLWSFLALTLDALAIAAQTLVGAALGGGD
ATGARRLAGRITRWSELFALALAAVFAAGYTVIPALFTTDAAVLERTQVAWWFFVALIPV
AGVVFALDGVLLGAGDAAFLRTATLAAALLGFLPAIWLSLAFDWGIAGIWSGLAAFMVLR
LAAVSRRTMSGKWATVGSEVPHGAAVAAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggacccggccgccgcgggaccccggcgcatcctgggtctggccctgcccacg
ctgggcgtgctcgtcgccgagccgctgtatctgctgttcgatctggccgtggtgggcagg
ctgggcgcgctggcgctggccgggctcgcggtcggcgggctgatcctggcgcaggtgagc
acgcagctgaccttcctctcctacggcaccaccgcccgctcggcgcggcggcacggcgca
ggtgaccggcccggcgcggtggccgagggcgtccaggccacctggctggccgtcgcggtc
ggcggcctgatcctggtggtgatgcaggccgcggccgggccggtcaccgccgccatttcc
ggtgggggcgacatcgccgccgaggcgttgccgtggctgcggatcgccttgttcggggtg
ccgttgatcctcatcgcgatggcgggtaacggctggctgcgcggggtgcaggacacccgg
cggccgctggtgttcgtggtgtgcgggctcgggctgtccgcggtgctgtgcccggtactg
gtccacgggctgctcggcgcgccgcgtctggaactggcgggttcggcggtggccaatgtc
gcggggcagacggtgacggcggccctgttcgtcacggcggtggtgcgggaacgggtgccg
ctcaccccgcactggtcggtgatgcgcgcgcaactcgtgctcgggcgggacctgatcctg
cgcagcctgtccttccaggcgtgcttcgtctccgcggcggcggtggcggcccgcttcggc
gcggcctcggtggccgcccaccaactggtgctgcaactgtggagcttcctcgcgctgacc
ctcgacgcgctggccatcgcggcccagaccctggtcggcgcggcgctgggcggcggtgac
gccacgggcgcgcgccggctggccgggcgcatcacgcggtggtcggagctgttcgcgctg
gcgctggcggcggtgttcgccgcgggctacacggtgatcccggcgctgttcaccaccgat
gcggcggtgctggagcgcacccaggtggcgtggtggttcttcgtcgcgctgatcccggtc
gcgggtgtcgtgttcgcgctcgacggggtgctgctcggcgcgggcgacgccgccttcctg
cgcacggccacgctcgcggcggcgctgctgggcttcctgcccgcgatctggttgtcgctg
gccttcgactgggggatcgccgggatctggtccgggctggccgcgttcatggtgttgcgg
ctggcggcggtgagccggcggacgatgtcggggaagtgggcgacggtcggcagcgaggtg
ccccacggcgctgccgtggccgccgagtag
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