Nocardia farcinica IFM 10152: NFA_40680
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Entry
NFA_40680 CDS
T00207
Symbol
nusA
Name
(GenBank) putative transcriptional termination/antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfa03021
]
NFA_40680 (nusA)
03009 Ribosome biogenesis [BR:
nfa03009
]
NFA_40680 (nusA)
Transcription machinery [BR:
nfa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NFA_40680 (nusA)
Ribosome biogenesis [BR:
nfa03009
]
Prokaryotic type
rRNA transcription factors
NFA_40680 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
KH_2
S1
Motif
Other DBs
NCBI-ProteinID:
BAD58917
NIH_Japan:
nfa40680
UniProt:
Q5YSC4
LinkDB
All DBs
Position
complement(4217532..4218560)
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AA seq
342 aa
AA seq
DB search
MNIEIEALRAIVADKGISIETVISAIESALLTAYRHTEGHQPNARVDINQRTGAVRVMAR
ELDADGNVISEWDDTPEGFGRIAATTARQVVLQRLRDAENEKSFGEFSTHEGDIVGGVVQ
RDARANARGTVVVRIGSELHGTEGLIPPAEQVPGETYEHGDRIKCYVVGVSRGPRGPQIT
LSRTHPNLVRRLFALEVPEIADGSVEIVAVAREAGHRSKIAVRSTVPGVNAKGACIGPMG
QRVRNVMSELAGEKIDIIDYADDPATFVGNALSPSKVVSVTIVDPDARAARVVVPDFQLS
LAIGKEGQNARLAARLTGWRIDIRSDAAPDVGDGMRTEAHRS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgaaatcgaagccctgcgcgcgatcgtcgccgacaaggggatctcgatcgag
acggtgatctccgcgatcgagtcggccctgctcaccgcctaccggcacaccgagggccac
cagcccaacgcgcgcgtcgacatcaaccagcgcaccggcgcggtccgggtgatggcgcgc
gagctcgacgccgacggcaacgtcatctccgagtgggacgacacccccgaaggcttcggg
cgcatcgccgcgaccaccgcccggcaggtcgtgttgcagcgcctgcgcgacgcggagaac
gagaagtccttcggcgagttctccacccacgagggcgacatcgtcggcggtgtggtgcag
cgcgacgcgcgcgccaacgcccgcggcaccgtcgtggtccgcataggcagcgaactgcac
ggcaccgagggcctgatcccgcccgccgagcaggtgccgggcgagacctacgagcacggt
gaccggatcaagtgctacgtcgtcggcgtctcgcgcggtccgcgcggcccgcagatcacg
ctctcgcgcacacaccccaacctggtccgccgcctcttcgcactcgaggtgcccgagatc
gccgacggctcggtggagatcgtggcggtcgcccgcgaggccgggcatcgctccaagatc
gcggtgcgctccacggtgcccggcgtcaacgccaagggcgcctgcatcggcccgatgggc
cagcgcgtgcgcaacgtgatgagcgagctggccggggagaagatcgacatcatcgactac
gccgacgacccggcgaccttcgtcggcaacgcgctctcgccctcgaaggtggtctcggtc
accatcgtcgatcccgacgcccgcgcggcgcgggtggtggtcccggacttccagctctcg
ctggccatcggcaaggaagggcagaacgcgcggctcgcggcccggctcaccggctggcgc
atcgacatccgcagcgacgccgccccggacgtgggcgacggcatgcggacggaggcgcat
cgcagttga
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