Nocardia farcinica IFM 10152: NFA_4110
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Entry
NFA_4110 CDS
T00207
Symbol
lysS
Name
(GenBank) putative lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NFA_4110 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nfa01007
]
NFA_4110 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfa03016
]
NFA_4110 (lysS)
Enzymes [BR:
nfa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NFA_4110 (lysS)
Amino acid related enzymes [BR:
nfa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NFA_4110 (lysS)
Transfer RNA biogenesis [BR:
nfa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NFA_4110 (lysS)
Prokaryotic type
Other AARSs
NFA_4110 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAD55253
UniProt:
Q5Z2T8
LinkDB
All DBs
Position
429563..431029
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AA seq
488 aa
AA seq
DB search
MRIRREKRERLLEAGTEAYPVVVPRTHSLAEIRAAHPDLAPDTQTGQQVGVAGRVIFLRN
TGKLCFATLQEGDGTKLQAMISLNGVGADALAAWKADVDLGDFVFVHGEVIASRTGELSV
MADSWSMAAKSLRPLPVAHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALE
RRGFLEVETPMLQTLHGGAAARPFVTHSNALDMDLYLRIAPELFLKRCVVGGLEKVFEIN
RNFRNEGADSTHSPEFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQVVTLADGTEY
DLRGEWATVEMYPSLSAALGEPVTPETTVEELRAIAARVGLEIPEEKGYGHGKLVEELWE
HQYGDKLYAPTFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQR
ERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLLMALTGLGIRETILF
PIVRPVAR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcggattcgccgggagaagcgcgagcggttgctcgaggcggggaccgaggcctacccg
gtggtcgtgccgcgcacgcacagcctggccgagatccgcgccgcccacccggacctggcg
ccggacacgcagaccggtcagcaggtcggcgtcgcgggccgcgtcatcttcctgcgcaac
accggcaaactgtgctttgccaccctgcaggagggtgacggcaccaagctgcaggcgatg
atcagcctcaacggggtcggcgcggacgcgctggccgcctggaaagccgatgtcgacctg
ggcgacttcgtgttcgtgcacggcgaggtgatcgcttcgcgcaccggcgaattgagcgtt
atggccgattcctggtcgatggcggcgaaatcgctgcggccgttgccggtggcgcacaag
gagatgaacgaggagtcccgggtccgtcagcgctacgtggacctcatcgtgcgcccggag
gccaggcagatggccaggacccgggtggccgtcgtgcgtgccctgcgcaacgcgctggag
cgccgcggattcctcgaggtcgagacgccgatgctgcagacgctgcacggtggtgcggcc
gcgcgcccgttcgtcacccattccaacgccctcgacatggacctctacctgcgcatcgcg
ccggagttgttcctgaagcgctgtgtggtgggcggactggagaaggtcttcgagatcaac
cggaacttccgcaacgagggtgccgactccacccattcgccggagttcgcgatgctggaa
acctatgaggcgtacggcacctacgacgactccgccacgatgatccgggaattgatccag
gaggtggcacaggaggctttgggcacccaggtggtgaccctggccgacggcaccgaatac
gatcttcgcggcgagtgggcgaccgtggagatgtatccgtcgctgtcggccgccctcggc
gagccggtgactccggaaaccacggtcgaggaattgcgtgccatcgcagcgcgtgtcggg
ctggaaattccggaggagaaggggtacggccacggcaaactggtcgaagaactctgggaa
caccagtacggcgacaagctgtatgccccgactttcgttcgcgacttcccggtggagacc
tctccgctcacccggcaacatcgcagcaagcccggcgtgaccgagaagtgggatctgtat
gtgcgcggcttcgagctggccaccggttattccgaactggtcgacccggtgatccagcgc
gagcggttcgtcgatcaggccagactcgcggcccagggggacgacgaggcaatggtcctg
gacgaggacttcctcgccgcgatggagcacggcatgccgccgaccaccggaaccggtatg
ggaatcgatcgcttgttgatggcgctcaccggtttgggaatccgggaaacgatactgttc
ccaattgtgcgtccggtcgctcgctga
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