Nocardia farcinica IFM 10152: NFA_41490
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Entry
NFA_41490 CDS
T00207
Name
(GenBank) putative RNA-binding protein
KO
K06959
protein Tex
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NFA_41490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
T2SSK
YqgF
HHH_6
HHH
AAA_lid_7
RNase_II_C_S1
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
BAD58998
NIH_Japan:
nfa41490
UniProt:
Q5YS43
LinkDB
All DBs
Position
complement(4294525..4296876)
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AA seq
783 aa
AA seq
DB search
MGTLAGPAGVGSRIAEELGVRESQVRAAVELLDAGSTVPFIARYRKEVTGGLDDAQLRTL
EERLHYLRELDERRAAIIESIRAQGKLDDELHRSLLLAETKARLEDIYLPYKPKRRTKAQ
IAREAGHEPVADALLADPTTDPAQYTAEQLDGARAILVERFAEDADLVGELREMMWNRGQ
LTSTVRPGKEEAGAKFADYFEFSEAFSSLPSHRVLALFRGEKEEVLSLQLEPDTEELAPG
ERSVYEGRIAAKFGIADRGRPADSWLLDTVRWAWRTKLQVSLGIDTRMRLRQAAEKDAVD
VFAANLRDLLLAAPAGTRTTMGLDPGYRTGVKVAVVDATGKVVATEVIYPHKPQGQTEKS
LAVLGALVARFGVELIAIGNGTASRETDALVAELISRIGATSDKKPTKVVVSEAGASVYS
ASAYASQELPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLG
AVVEDAVNAVGVDVNTASVPLLSRVSGIGSAVAESIVAHRDQNGPFRSRTALLDVPRLGP
KAFEQCAGFLRIRGGDDPLDTSAVHPEAYPVVRRILEATGRRVDELIGNTGVLRSLRPAE
FTDEKFGVPTVTDIIGELEKPGRDPRPEFKTAEFAAGVEKVADLKPGMVLEGVVTNVAAF
GAFVDVGVHQDGLVHVSAMSHSFVKDPREVVKSGDVVKVKVLEVDVARQRIGLSLRLDDE
PGAAKGERGGQREGGRRGGSGGAGGGQRQNGQGRQQSRNQGRRNAPAPSGSMADALRRAG
FGK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgggcacgctcgcgggtccggcgggcgtcggcagccgcatcgccgaggaactcggggtg
cgggagagccaggtccgcgccgcggtcgaactgctcgacgcgggctcgaccgtgcccttc
atcgcccggtaccgcaaggaggtgaccggcggcctcgacgacgcgcagctgcgcacgctg
gaggaacgcctgcactacctgcgcgagctggacgagcgccgcgccgccatcatcgaatcc
atccgcgcccagggcaaactcgacgacgagctgcaccgcagcctgctgctggccgagacc
aaggcccgcctcgaggacatctacctgccctacaagcccaagcggcgcaccaaggcccag
atcgcgcgcgaggccgggcacgagccggtggccgacgccctgctggccgaccccaccacc
gatcccgcgcagtacaccgccgagcagctcgacggcgcccgcgcgatcctggtcgagcgg
ttcgccgaagacgccgacctggtcggtgagttgcgcgagatgatgtggaatcgcgggcag
ctcacctccaccgtgcggcccggcaaggaggaggcgggggcgaagttcgccgactacttc
gagttcagcgaggcgttcagctcgctgccctcacaccgggtgctcgcgctgttccgcggg
gagaaggaggaggtgctcagcctccagctcgagcccgacaccgaggaactcgcgccgggg
gaacgcagcgtctacgagggccgcatcgccgcgaagttcggcatcgccgatcgcggacgc
cccgccgacagctggctgctcgacaccgtgcggtgggcgtggcggaccaagttgcaggtg
agcctgggcatcgacaccaggatgcggctgcggcaggcggcggagaaggacgccgtcgac
gtcttcgcggcgaacctgcgcgatctgctgctggccgcccccgcgggcacccgcaccacg
atgggccttgaccccggctaccgcaccggtgtcaaggtggccgtcgtcgacgcgaccggc
aaggtggtcgcgaccgaggtgatctacccgcacaagccgcagggccagaccgagaagtcg
ctggccgtgctcggcgcgctggtggcccgcttcggtgtcgaactgatcgcgatcggcaac
gggacggcttcgcgcgagaccgacgcgctggtggccgagctcatctcccgcatcggtgcc
acgtcggacaagaagccgaccaaggtggtcgtctccgaggccggcgcctcggtgtactcc
gcctccgcctacgcctcccaggaactgccggaactggacgtctcgctgcgcggcgcggtc
tcgatcgcacgtcggttgcaggacccgctggccgagctggtgaagatcgaccccaagtcg
atcggcgtgggccagtatcagcacgacgtctccgagacgctgctggcccgctcgctgggc
gcggtggtcgaggacgcggtcaacgcggtcggcgtcgacgtcaacaccgcgtcggtgccg
ctgctgtcgcgggtgtcgggcatcggctcggccgtcgcggagagcatcgtcgcccatcgg
gaccagaacgggccgttccgttcccgtaccgccctgctcgacgtgccccggctcgggccg
aaggcattcgaacagtgcgcgggcttcctgcgcatccgcggcggcgacgatccgctggac
acctcggcggtgcacccggaggcctacccggtggtgcggcgcattctcgaggccaccggc
cgccgcgtcgacgagctgatcggcaacaccggcgtgctccggtcgttgcggcccgccgag
ttcaccgacgagaagttcggcgtgcccaccgtcaccgacatcatcggcgaactggagaaa
cccggccgcgacccgcgcccggagttcaagaccgccgaattcgccgccggggtggagaag
gtcgccgacctgaagccgggcatggtgctcgagggcgtggtgaccaacgtcgcggcgttc
ggcgcgttcgtcgacgtcggcgtccaccaggacgggctggtgcacgtctcggccatgtcg
cactccttcgtcaaggacccgcgcgaggtcgtcaagtccggtgacgtggtgaaggtgaag
gtgctcgaggtcgacgtcgcccgtcagcgcatcggcctgtcgctgcggctggacgacgag
ccgggcgccgccaagggcgagcgcggcggccagcgcgagggcgggcgccgcggcggttcc
ggtggtgccggcggcggacaacggcagaatggacaggggcggcagcagagtcgcaaccag
ggcaggcgcaacgcccccgcacccagcgggtcgatggccgacgccctgcgccgcgccgga
ttcgggaagtag
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