Nocardia farcinica IFM 10152: NFA_41600
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Entry
NFA_41600 CDS
T00207
Symbol
ffh
Name
(GenBank) putative signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02024
Quorum sensing
nfa03060
Protein export
nfa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NFA_41600 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NFA_41600 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFA_41600 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nfa02044
]
NFA_41600 (ffh)
Enzymes [BR:
nfa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NFA_41600 (ffh)
Secretion system [BR:
nfa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NFA_41600 (ffh)
Eukaryotic Sec-SRP protein
NFA_41600 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
nSTAND3
cobW
AAA_31
APS_kinase
TctA
AAA_16
AAA_24
AAA_22
NPHP3_N
6PF2K
AAA_18
ArsA_ATPase
Thymidylate_kin
TsaE
AAA_33
NTPase_1
MobB
AAA_30
AAA_14
NACHT
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
BAD59009
NIH_Japan:
nfa41600
UniProt:
Q5YS32
LinkDB
All DBs
Position
complement(4306663..4308225)
Genome browser
AA seq
520 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLSPADIDATCREIRLALLEADVALPVVRGFIARIKERAK
GAEVSAALNPAQQVVKIVNEELVGILGGETRRLNLAKTPPTVIMLAGLQGAGKTTLAGKL
AKYLKGQGHQPLLVACDLQRPGAVTQLQVVGERAGVPVFAPHPGTSVGGGENPLGITAAD
PVEVARGGVAEARNKQYDIVIVDTAGRLGIDEELMRQAASIRDAVQPDETLFVLDAMIGQ
DAVTTAEAFRDGVGFTGVVLTKLDGDARGGAALSVRNVTGAPIMFASTGEKLEDFDVFHP
DRMASRILGMGDVLTLIEQAEQVYDAQQAEEAARKIGSGELTLEDFLEQMLAIRKMGPIG
NLLGMLPGAGQMKDVLAQVDDKQLDRVQAIIRGMTPAERANPKIINASRRLRIANGSGVT
VSEVNQLVDRFFEAKKMMAMMGRQMGMPGSRRNAKKGKKGKKGGRGPTPPKVRGGFPGMP
AGMPGMPAGMPDISNMPAGLNELPPGLENFDLSKLKFPKK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctgtccgaccggcttaccggtgccctgaaggatctgcgcggtaagggg
cgtctgtcaccggccgacatcgacgccacgtgccgggagatccggttggccctgctcgag
gccgacgtcgcgctgcccgtggtgcgcggtttcatcgccaggatcaaggagcgcgcgaag
ggcgcggaggtctccgcggcgctgaatcccgcccagcaggtcgtcaagatcgtcaacgag
gaactcgtcggcatcctcggcggcgagacccgcaggctcaacctggccaagaccccgccg
acggtgatcatgctcgccggtctgcagggcgccggtaagacgacgctggcgggcaagctc
gcgaaatacctgaaggggcagggacatcagcccttgctggtggcctgcgacctgcagcgc
cccggcgccgtcacccagctccaggtggtcggcgagcgcgcgggcgtgcccgtcttcgcc
ccgcacccgggcacctcggtgggcggcggggagaacccgctgggcatcaccgcggccgac
ccggtcgaggtcgcgcgcggcggcgtcgccgaggcccgcaacaagcagtacgacatcgtc
atcgtcgacaccgcgggccgcctcggcatcgacgaggagctgatgcgccaggccgcgagc
atccgcgacgccgtccagccggacgagacgctgttcgtgctcgacgccatgatcggtcag
gacgcggtgaccaccgccgaagccttccgcgacggcgtcggcttcaccggcgtggtgctc
accaagctcgacggcgacgcccgcggcggtgcggcgctgtcggtgcgcaacgtcaccggc
gcgccgatcatgttcgcctccaccggtgagaagctcgaggacttcgacgtcttccacccg
gaccggatggccagccgcatcctgggcatgggtgacgtgctcaccctcatcgagcaggcc
gaacaggtctacgacgcgcagcaggccgaggaggcggcgcgcaagatcggcagcggcgaa
ctcacgctggaggacttcctcgagcagatgctcgccatccgcaagatgggcccgatcggc
aatctgctgggcatgctgccgggcgcgggtcagatgaaggacgtgctcgcccaggtcgac
gacaagcagctcgaccgggtgcaggcgatcatccgtggcatgacccccgccgagcgggcc
aaccccaagatcatcaacgcctcccggcgcctgcgcatcgccaacggctccggtgtcacg
gtctcggaggtcaaccagctggtcgaccggttcttcgaggccaagaagatgatggcgatg
atgggccgccagatgggcatgcccggctcgcgccgcaacgccaagaagggcaagaagggc
aagaagggcggtcgcggccccaccccgccgaaggtgcgcggcggattcccgggcatgccc
gccggaatgccggggatgcccgccgggatgcccgacatctccaacatgcccgcgggtctc
aacgagctgccgccggggctggagaacttcgatctgtcgaagctgaagttcccgaagaag
tag
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