Nocardia farcinica IFM 10152: NFA_42100
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Entry
NFA_42100 CDS
T00207
Name
(GenBank) putative histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfa03032
]
NFA_42100
03036 Chromosome and associated proteins [BR:
nfa03036
]
NFA_42100
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_42100
DNA replication proteins [BR:
nfa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NFA_42100
Chromosome and associated proteins [BR:
nfa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NFA_42100
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NFA_42100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAD59059
NIH_Japan:
nfa42100
UniProt:
Q5YRY2
LinkDB
All DBs
Position
complement(4360616..4361314)
Genome browser
AA seq
232 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEHVVDTIVRAVHKGQSVTITGFGVFEQRKRAPRVA
RNPRTGETVKVKATSVPAFRPGAQFKAVIAGKQKLAATGPAVKRGVNAPVAAKKTAAKKT
TAAAKKTAAKKTTTATKAPAKKTTATKAPAKSTARKTTTATKTAAKKAPAKKTTATKASA
TKASATKATAAKKTTTAAKKTTATKATAAKKTTAAKKAPAKKTAAKKTAARR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgacgttctgaccgaaaagttgggtacggacaggcgcacg
gctaccgcggcagtcgagcatgttgtcgacaccatcgtgcgtgcagtgcacaagggccag
agcgtcaccatcaccggattcggtgtcttcgaacagcgcaagcgtgccccccgtgtcgcc
cggaacccgcgcaccggcgaaaccgtcaaggtgaaagccacttcggtgcccgcgttccgg
cccggcgcccaattcaaggcggtgatcgcgggtaagcagaagctggccgcgaccggcccg
gccgtcaagcggggcgtgaatgcccctgtggcggccaagaagacggcggccaagaagacc
acggccgccgccaagaagaccgccgccaagaagaccaccacggccaccaaggcccccgcc
aagaagacgacggcgaccaaggccccggcgaagtcgaccgcacggaagaccaccacggcc
accaagaccgccgccaagaaggcacccgcgaagaagacgacggccaccaaggcttcggcg
accaaggcgtcggcgaccaaggccaccgcggccaagaagaccaccaccgccgccaagaag
accacggcgacgaaggccacggccgccaagaagaccacggccgcgaagaaggcgcccgcg
aagaagaccgcggccaagaagaccgccgcccgccgctga
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