Nocardia farcinica IFM 10152: NFA_4320
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Entry
NFA_4320 CDS
T00207
Symbol
sms
Name
(GenBank) putative DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_4320 (sms)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NFA_4320 (sms)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DUF7125
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_16
nSTAND_NTPase5
NACHT
AAA_30
Lon_C
Rad51
AAA
nSTAND3
AAA_5
AAA_19
DUF7129
AAA_14
RecA_N
ABC_tran
NTPase_1
AAA_29
AAA_24
PAXNEB
RsgA_GTPase
SLFN-g3_helicase
NPHP3_N
Zn_ribbon_3
HypA
Zn_ribbon_8
NB-ARC
MCM
TniB
DAP3
Motif
Other DBs
NCBI-ProteinID:
BAD55274
NIH_Japan:
nfa4320
UniProt:
Q5Z2R7
LinkDB
All DBs
Position
complement(448069..449457)
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AA seq
462 aa
AA seq
DB search
MAKTKAIFRCSACSHEVAKWVGKCPDCGAWGTVDEVAVSAGAPGAPGRRAMLPSTAAAPI
SAIDSQVTKARPTGVSELDRVLGGGVVAGSVVLLSGEPGVGKSTLLLEVAHQWARRPGEK
ALYVTAEESAGQVRLRADRTGAVHEQVFLAAESDLSIVLGHVEQVRPTLLVVDSVQTMLA
PEAEGVIGGVTQVRAVTAALTSLAKASGIAVLLVGHVTKDGNVAGPRTLEHLVDVVLQFE
GDKNSTLRMVRGIKNRFGSADEVGCFELHEDGIACVDDPSGLFLHHRTDPVPGTAVTVAM
DGKRPLVGEVQGLTVKTEIPAPRRAVSGLDYNRVAMVLAVLQSRGRVFLGKHDVYAATVG
GMRLAEPAADLAIALAIASAECDTALPAGWVILGEVGLAGEVRKVTGVARRLAEAERLGF
TTALVPPGSERLKGATIRVHEVGDVRSALRISGLRGRKSGGD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagaccaaggcgatcttccggtgctcggcctgctcgcacgaggtggccaaatgg
gtgggcaagtgcccggactgcggcgcctggggcacggtggacgaggtggcggtctcggcc
ggggcgccgggtgcgcccggtcggcgcgcgatgctgccgagcaccgcggccgcaccgatc
tccgcgatcgattcgcaggtcaccaaggcccggcccaccggagtgtcggaactggaccgg
gtgctcggcggcggggtggtggccggatcggtggtgctgctctccggtgagcccggggtg
ggcaagtccaccctgctgctcgaggtcgcccaccagtgggcgcgccggcccggggagaag
gcgctctacgtcaccgccgaggagtcggccgggcaggtccggctgcgcgccgaccgcacc
ggcgccgtgcacgagcaggtcttcctcgccgcggagtcggacctgtcgatcgtgctcggc
cacgtcgagcaggtgcggccgacgctgctggtggtggactcggtgcagaccatgctcgcg
cccgaggcggagggcgtcatcggcggtgtcacccaggtccgggcggtgaccgcggcactc
acctcgctggccaaggccagcggtatcgcggtgctgctggtcggtcacgtcaccaaggac
ggcaacgtggccgggccccgcaccctcgaacacctggtggacgtggtgctccagttcgag
ggcgacaagaactccacgctgcgcatggtgcgcggcatcaagaaccgcttcggcagcgcc
gacgaggtgggctgcttcgaactgcacgaagacggcatcgcctgcgtggacgacccgtcc
gggctgttcctgcaccaccgcaccgacccggtgccgggcaccgcggtcaccgtggccatg
gacggcaagcggccgctggtcggcgaggtgcaggggctgacggtgaagaccgagatcccg
gcaccgcgccgcgcggtcagcggcctggactacaaccgggtcgcgatggtgctcgcggtg
ctgcagagccgcggccgggtgttcctcggcaagcacgacgtgtacgccgccaccgtcggt
ggcatgcggctggccgaacccgccgccgatctggccatcgcgctggccatcgccagcgcg
gaatgcgataccgcgctgcccgccggctgggtgatcctcggcgaggtcggcctggcgggc
gaggtgcgcaaggtgaccggtgtggcgcggcggctggccgaggccgagcggctcgggttc
accaccgcgctggtaccgcccggctcggagcggttgaagggcgcgaccattcgcgtccac
gaggtcggggacgtgcgttcggcgttgcgcatcagcggattacgcggacgcaagtccggc
ggtgactga
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