Nocardia farcinica IFM 10152: NFA_44000
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Entry
NFA_44000 CDS
T00207
Symbol
crtE2
Name
(GenBank) putative geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00900
Terpenoid backbone biosynthesis
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
Module
nfa_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NFA_44000 (crtE2)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
NFA_44000 (crtE2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nfa01006
]
NFA_44000 (crtE2)
Enzymes [BR:
nfa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NFA_44000 (crtE2)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NFA_44000 (crtE2)
2.5.1.29 geranylgeranyl diphosphate synthase
NFA_44000 (crtE2)
Prenyltransferases [BR:
nfa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NFA_44000 (crtE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3100
Motif
Other DBs
NCBI-ProteinID:
BAD59249
NIH_Japan:
nfa44000
UniProt:
Q5YRE2
LinkDB
All DBs
Position
complement(4560086..4561195)
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AA seq
369 aa
AA seq
DB search
MAGETMIDRPVHTEAPPVPEHPAAWCTRMRDDTARVLDDFVRARRREHLGAPETAVLGQV
IGDFVAGGKYLRSALHLAGWSTVAPVGAAAIRAAASAELLHCFALMQDDVMDESARRRGR
PAAHVRFAQWHARQGFSGSSDRFGESAATLAADLCLVWAEQLLRESGVDAAALARALPRY
DAMRSELAVGQFRDLVNDARRRPALADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLA
ALGRYGVAIGEAFQVRDDLLGVFGDPGATGKPVGADLRNGKATTVVVLAREYADGVTRRE
LARLAALPELGAEEIARYVRVIAETGAPRRLELLIAHRLREGLAAIAGLEPGARAVLTHL
AHACTDRSR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagacgatgatcgaccggccggtgcataccgaggcgcctccggtgcccgag
catccggccgcgtggtgcacccggatgcgcgacgacaccgcgcgcgtgctcgacgatttc
gtgcgcgcgcgccgccgcgagcacctgggcgcgcccgaaaccgccgtgctggggcaggtg
atcggcgacttcgtcgcgggcggcaagtacctgcgttcggcgctgcacctggcgggctgg
tcgaccgtggcgccggtcggcgcggccgcgatccgcgcggcggcgagcgcggaactgctg
cactgcttcgcgctcatgcaggacgacgtgatggacgagtccgcgcggcggcgcggccgg
cccgcagcgcacgtccggttcgcgcagtggcatgcgcggcaaggattttcgggatcgtcg
gaccgcttcggcgagtccgcggcgacgctggcggccgacctgtgcctggtgtgggccgag
cagctgctgcgcgagagcggggtggacgccgccgcactggccagggcgttgccccgctac
gacgccatgcgtagcgaactggcggtcgggcagttccgcgacctggtgaacgacgcgcgg
cggcggccggcactggccgatgtgctggcggtggcgcgggcgaagtcggggcactacacc
gtgcgccgaccgctggagctgggggcggagctggccggggcaccgccggcggtgctcgcg
gcgctcggccggtacggggtcgccatcggggaggcgttccaggtgcgcgacgacctgctc
ggcgtcttcggcgatccgggcgcgaccggcaagccggtcggggcggacctgcgcaacggc
aaggccaccaccgtggtggtgctggcccgcgaatacgccgacggcgtgacgcggcgggag
ctggcacggctggccgcactgccggaactcggtgccgaggagatcgcccggtacgtgcgg
gtgatcgcggagaccggcgcgccacggcggctcgaactgctgatcgcgcaccggctgcgc
gaagggctcgccgccatcgccgggctcgagccgggcgcccgcgcggtgctcacccatctc
gcccacgcgtgcaccgaccggtcgcgctga
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