KEGG   Nocardia farcinica IFM 10152: NFA_44280
Entry
NFA_44280         CDS       T00207                                 
Name
(GenBank) hypothetical protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
nfa  Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nfa02048]
    NFA_44280
Enzymes [BR:nfa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NFA_44280
Prokaryotic defense system [BR:nfa02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    NFA_44280
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: BAD59279
NIH_Japan: nfa44280
UniProt: Q5YRB2
LinkDB
Position
complement(4590706..4593450)
AA seq 914 aa
MLGTATLSAWAKSDREGGSLSLVRHLADSGEVAKLVWDRWLPTHTRQRISVGLPGGEADG
RTLLVWLAATHDIGKLTPAFACQVPELADAMHDRGLRMPDALGDRKALPHSLAGEVTLLE
FLTGLGWDREVAKTYAVVAGSHHGVPPTVREVRNAPARTTLFGEGQWSRSRDELLRFVTE
RTGAWELLERLRLIPLTVTQQSLLTAAVIVTDWIASNQDLFPLDEARVSSTAAPAVWELL
GLPHPWQPSASELHDDPSQRRFFCDRFGWPPSIHPRPLQLECLRVADVTPVPGLMVVEAP
MGEGKTEAALAAAEILAQRFGLGGIFVALPTMATSDAMFARVRKWAENLPVPPAAMFLAH
GKAALNAEFTSLHRRGFVSIGTDCADSGVVAHAWFVGKKGPLANVVVGTIDQILRAALKT
RHLMLRHLALANKVVVIDEVHAADSYMSTYLCRSLEWLAAYRVPVILLSATLPPSQREAL
VLAYARGYGTGDDEVCLTDHGYPAITHWPNPELSTTVAASGRSIAGIEIAHVADDLDVLA
ERVRQALADGGIAGVVCNTVARAQETYLALERAGFPEDELLLIHSRFVASHRAELEARLR
AMLGPPDGGTVRPDRLVVVGTQVIEQSLDIDLDLLITDLAPMDLLLQRIGRLHRHDRPAR
PPKLVRPSCWVRGADWNEEPPQPVRGSQAVYGLARLLRCAAVLRRRAALTVPDDVPGLVA
DAYHEQLEVPTDWLAAYHLAEKQWHEHVDRQREKARTYLLSAPYGDNRTLHGWVATGIPD
DADGVGGQAQVRDAEDTIEAIVVQRCGDHVRALPQVPEIGGTTVPTDAEPPVWLAKKLAA
CTIRLPAMLTRYGRSGTVIRALEDTWYPGWQRVHWLAGELVLELDEQCTAELAGHHLEYD
TRLGLLVAPAKEGK
NT seq 2745 nt   +upstreamnt  +downstreamnt
gtgctcggtaccgcgaccttgtctgcgtgggcgaagagtgatcgtgagggtggaagcctt
tctctcgtaaggcatctcgctgattcgggtgaggtcgcgaagttggtctgggaccgttgg
ctgccgacccatacacggcagcggatctcggttggcctccctggcggcgaagcggatgga
cggacgctgctcgtctggctggcggctacgcacgacatcgggaagctcacgccggcgttc
gcgtgccaggttcccgagctggccgatgcgatgcacgaccgagggctgcgaatgccggat
gcgctcggtgaccgaaaggcattgccgcacagcctggccggcgaggttacgttgctcgag
ttcctgaccggcctggggtgggaccgtgaggtggccaagacgtacgccgtggtcgccggt
agtcatcacggtgtcccgccgaccgtccgcgaggtgcggaacgctccggctcggaccaca
ctgttcggcgagggccagtggtcgcggtctcgcgacgagctgctgcggttcgtcaccgag
cggacaggcgcgtgggagctgctggagcgtttgcgcctaatccctctgaccgtgactcaa
caaagtctgctcacggccgccgtcatcgtcacggattggatcgcaagcaatcaagatctc
tttccgctggacgaggcgcgtgtgtcgagcactgccgcgccggcggtgtgggagctgctc
ggcctgccgcacccgtggcaaccgtctgcgtccgagctgcacgacgacccgtcgcagcgg
cggttcttctgcgaccggttcggctggccgccgtccattcatccgcgtccgctacagctc
gaatgtctacgagtcgctgacgtaacgcccgttcccggactgatggtcgtggaagcgccg
atgggcgaggggaagacggaggccgcgctcgccgccgccgagatactcgcgcagcggttc
ggtctcggtggcatattcgtcgcactgccgacgatggcaacctccgacgcgatgttcgcg
cgcgttcggaagtgggcagagaacctgcccgtcccacccgcggcgatgttcctcgcgcac
gggaaagcagcgttgaatgcggaattcacctcgctgcatcgccggggcttcgtcagcatc
ggcaccgattgcgcagacagcggcgttgtcgcgcacgcctggttcgtcggcaagaagggc
cctctggcgaacgtggtggtaggcacgatcgaccagatccttcgggcggccttgaagacc
cggcatctgatgttgcgccatcttgcgctggccaacaaagtggttgtcatcgacgaggtg
catgccgcggacagttacatgtcgacgtacctgtgccggagtttggagtggctggctgcc
taccgggtgcccgtcatcctgctgtcggcgacactgccgccgagccagcgagaagcactg
gtactggcctacgcacgtggatacggaaccggcgacgacgaggtctgccttaccgaccac
ggctacccggccatcacgcattggccgaatcccgagctgagtacgacggtggccgcgtcg
ggccgctcgatcgccggcatcgagatcgcccacgtggcagacgatctcgacgtattggcc
gaacgagtccgtcaagccctggcggacggcggcatcgccggggtggtatgcaataccgtc
gcacgagcgcaggaaacctacctggccctggagcgggctggcttccccgaagacgaattg
ctgctgatccattcacggttcgtcgccagccaccgcgcggagctggaggcacgcctgcga
gcgatgctgggaccgccggacggtggaacggtgcggcccgatcgtctcgtcgtggtgggc
acacaggtgatcgaacagtcactggacattgatctcgacctgctgatcaccgacttggcg
ccgatggacttgctgttgcaacgcatcggtcgcctacaccggcatgaccggccggcacgt
ccgccgaaactcgtgcgcccgagctgttgggtgcggggcgcggactggaacgaggagccg
ccccaaccggtgcggggctcgcaggctgtttacggcctggcccgcctgctgcgctgtgcc
gcggtgctgcgccggcgcgccgccctgaccgtgcccgacgatgtgccgggactggtagcc
gacgcctaccacgaacagctcgaggtgcccaccgactggctcgccgcctaccacctggcg
gagaagcagtggcacgaacacgtcgaccgccagcgagagaaagcgcgaacctatctgttg
tcagctccctacggcgacaatcgaaccctccacggctgggtggcgacgggaatcccggac
gacgccgacggcgtcggcggccaagcccaagttcgcgacgcggaggacaccatcgaagcg
atcgtcgtccaacggtgtggtgaccatgtgcgggcgctcccgcaagtgccggaaatcgga
ggaacgacggtgccgaccgatgcggaaccgccggtgtggctcgccaagaagcttgccgcc
tgcaccatccggctgcccgccatgctcactcgctacggacgcagcggcaccgtcatccgt
gcactcgaagacacctggtatccgggatggcagcgggtgcattggctggcaggcgaattg
gtcctggaactggatgagcagtgcacggccgaactcgccgggcaccatctcgagtacgac
acccggctcggacttctggtggcccccgcgaaggaggggaaatga

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