Nocardia farcinica IFM 10152: NFA_4470
Help
Entry
NFA_4470 CDS
T00207
Name
(GenBank) putative transcriptional regulator
KO
K22107
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
NFA_4470
Transcription factors [BR:
nfa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
NFA_4470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_20
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BAD55289
NIH_Japan:
nfa4470
UniProt:
Q5Z2Q2
LinkDB
All DBs
Position
complement(463036..463671)
Genome browser
AA seq
211 aa
AA seq
DB search
MASPSRSQPAAARPATVTTLSEDELSSAAQRERRKRILDATLALASKGGYDAVQMRAVAE
RADVAVGTLYRYFPSKVHLLVSALAREFEQFESKRKPLAGATPRERMHLLLTQITRMMQR
DPLLTEAMTRAFMFADASAAAEVDRVGKVMDRVFARAMNDGEPDERQLAIARVISDVWLS
NLVAWLTRRASATDVSDRLELTVDLLLGDKE
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccgtcccgatcgcagcccgccgccgcgcgccccgcgacagtcaccaccctg
agcgaggacgagctgagctcggcggcgcagcgggagcgccgcaagcgcatcctcgacgcc
accctcgcgctggcgtccaagggcgggtacgacgcggtgcagatgcgcgcggtggccgag
cgggccgacgtggccgtgggaaccctctaccggtacttcccgtccaaggtgcacctgctg
gtgtccgcgctggccagggagttcgagcagttcgagagcaaacgcaagccgctggcgggc
gccacgccgcgcgagcgcatgcacctgctgctcacccagatcacccggatgatgcagcgc
gacccgctgctcaccgaggcgatgacccgggcgttcatgttcgccgacgcctccgcggcc
gccgaggtggaccgggtcggcaaggtgatggaccgggtcttcgcccgggcgatgaacgac
ggcgagccggatgagcgccagctcgccatcgcccgcgtcatcagcgacgtgtggctgtcg
aatctggtggcctggctcacccgccgcgcctcggccaccgacgtgagcgaccggctggaa
ctgaccgtcgatctgctgctcggcgacaaggagtga
DBGET
integrated database retrieval system
