Nocardia farcinica IFM 10152: NFA_47040
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Entry
NFA_47040 CDS
T00207
Name
(GenBank) putative acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00061
Fatty acid biosynthesis
nfa00071
Fatty acid degradation
nfa01100
Metabolic pathways
nfa01212
Fatty acid metabolism
nfa02024
Quorum sensing
nfa04146
Peroxisome
Module
nfa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NFA_47040
00071 Fatty acid degradation
NFA_47040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NFA_47040
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFA_47040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nfa01004
]
NFA_47040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfa04147
]
NFA_47040
Enzymes [BR:
nfa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NFA_47040
Lipid biosynthesis proteins [BR:
nfa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NFA_47040
Exosome [BR:
nfa04147
]
Exosomal proteins
Exosomal proteins of breast milk
NFA_47040
Exosomal proteins of breast cancer cells
NFA_47040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAD59555
NIH_Japan:
nfa47040
UniProt:
Q5YQI6
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All DBs
Position
4913204..4914997
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AA seq
597 aa
AA seq
DB search
MREFEVPASYTIPDDANNSDNVFRHAEQSPNAVLFNVPNGSGGWKDVTASQFAKTVTGVA
KGLIAAGIELGDRVAIMAPTRYEWQVLDFAVWAAGGCTVAIYDSSSAEQAKWILQDSATK
LLVVDSDKHRAVIDEIETGALPDLAEIVQIDKGAVDDLIERGKDLDDQVVHERRKQVGAS
SPATLIYTSGTTGRPKGVMLSHANLWAESTADRIALGKYVTEGKKTLMFLPLAHVFARAV
ALAAFDAKVIVAHTSDWTTLVDQFGAFKPHFILSVPRVFEKVFNGAKQKAHDGGKGKIFD
AAAATAIEYSEALDNGGPGLVLKLKHALFDKLVYSKLKTALGGQCEAAVSGGGPLGARLG
HFFRGVGVTIYEGYGLTETTAAFSVNTPEHIRVGSVGRPIEGHAAKIAEDGELLLRGPVV
FNGYWGNEAATEEAFADGWFKTGDLGAIDADGFITITGRKKEIIVTAGGKNVSPALLEDS
LRAHPLISQVMVVGDGQPFIGALITLDPEALPGWKERHGLAADTAIETVVEHPELVAEID
AAVAETNKKVSHAEQIKKHRILTVDWTQEGGELTPKMSLKRAVVMKQYAAEVEKIYA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagttcgaagtcccggcttcctacacaattccggatgacgcgaacaattccgac
aacgtcttccgccatgccgaacagtcgccgaacgccgtgctgttcaacgtgccgaacggc
agtggtggctggaaggacgtcacggcgtcgcagttcgcgaagaccgtcaccggtgtggcg
aagggcctgatcgccgcgggcatcgaactcggcgaccgcgtggccatcatggcaccgacc
cgctacgagtggcaggtgctcgacttcgccgtctgggccgccggtggctgcaccgtcgcc
atctacgacagctcctccgccgagcaggccaagtggatcctgcaggactccgcgaccaag
ctgctggtggtcgacagcgacaagcaccgcgccgtgatcgacgagatcgagaccggcgcg
ctgcccgacctcgccgagatcgtgcagatcgacaagggcgccgtcgacgacctgatcgag
cgcggcaaggacctcgacgaccaggtcgtacacgagcggcgcaagcaggtcggcgcgagt
tcgcccgccaccctgatctacacctcgggcaccaccggtcggcccaagggcgtcatgctc
tcgcacgccaacctgtgggcggagtccaccgccgatcgcatcgccctgggcaagtacgtc
accgagggcaagaagaccctcatgttcctgccgctggcgcacgtgttcgcccgcgcggtg
gcgctggcggccttcgacgccaaggtgatcgtcgcccacacctccgactggaccacgctg
gtggaccagttcggcgcgttcaagccgcacttcatcctctcggtgccgcgcgtgttcgag
aaggtgttcaacggcgccaagcagaaggcgcacgacggcggcaagggcaagatcttcgac
gccgccgccgcgaccgcgatcgagtacagcgaggcgctcgacaacggcggccccggcctg
gtgctcaagctcaagcacgccctgttcgacaagctggtctacagcaagctcaagaccgcg
ctgggcgggcagtgcgaggcggccgtctccggcggcggcccgctgggcgcgcggctcggc
cacttcttccgcggcgtcggcgtgacgatctacgaaggctacggcctgaccgagaccacg
gccgcgttcagcgtgaacacccccgagcacatccgggtcggctcggtcggccgcccgatc
gagggccacgccgccaagatcgccgaggacggcgagctgctgctgcgcggcccggtggtg
ttcaacggctactggggcaacgaggccgccaccgaggaggccttcgccgacggctggttc
aagaccggtgacctgggcgcgatcgacgccgacgggttcatcacgatcaccggccgcaag
aaggagatcatcgtcaccgcgggcggcaagaacgtctcccccgcgctgctcgaggactcg
ctgcgcgcgcatccgctgatcagccaggtgatggtggtcggcgacggccagccgttcatc
ggcgcgctgatcaccctcgacccggaggcgctgccgggatggaaggaacggcacggcctg
gccgcggacaccgcgatcgagacggtcgtcgagcatcccgaactggtcgccgagatcgac
gccgcggtggccgagaccaacaagaaggtctcgcacgccgaacagatcaagaagcaccgc
atcctgaccgtggactggacccaggaaggcggcgagctgacccccaagatgtcgctcaag
cgcgctgtggtcatgaagcagtacgcggccgaggtggagaagatctacgcctga
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