Nocardia farcinica IFM 10152: NFA_47930
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Entry
NFA_47930 CDS
T00207
Symbol
sbcD
Name
(GenBank) putative ATP-dependent dsDNA exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_47930 (sbcD)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NFA_47930 (sbcD)
Archaeal homologous recombinant proteins
NFA_47930 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
rOmpB_passenger
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BAD59645
NIH_Japan:
nfa47930
UniProt:
Q5YQ96
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All DBs
Position
complement(5005080..5006264)
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AA seq
394 aa
AA seq
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MRLLHTSDWHVGRTFHGVDLLVDQARSLAAIAELVAEESVDVVVVPGDVYDRSIPSADAI
AVCTRGLEAIRAAGAVIVATSGNHDSPARLGAGASFAAAGGLYLRTRLAEADRPIVLRDD
AGEVAFYGIPYLEPEVVRGELGVPRARSHAEVLDVVMDRVRADLAGRPGVRSVVLAHAFV
VGGAATGSERSISVGGVETVPLSAFDGVDYVALGHLHSPQTLSASVRYSGSPLPYSFGEA
SHRKAVWIIDLDESGVAEVRRRDLPVVRGLSRLTGTLEELLSDPAHEDAVAHYVSATLTD
TARPIDAMRRLRNRFPHAVHVEWVRPDADSVLHYRERVRGRDDAEVARSFLTDVRGEPST
AELRWLERALAAGVTEPEGAAVLAGSDAAEELSA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctgcacacctcggattggcatgtgggccggacgtttcacggcgtcgatctg
ctcgtcgatcaggcgcgctcgctggcggcgatcgcggagctggtggccgaggagtcggtg
gacgtggtggtggtgccgggtgacgtctacgaccgctcgattcccagcgcggacgcgatc
gcggtgtgcaccaggggtttggaggcgatcagggccgcgggtgcggtgatcgtggcgacg
tcgggcaatcatgattcgcctgctcggctcggggcgggggcgagtttcgcggcggcgggc
gggttgtatctgcggacgcggttggcggaggcggaccggccgatcgtgttgcgtgacgat
gcgggtgaggtggccttctacggcattccgtatctggagccggaggtggtgcgcggggag
ttgggtgtgccgcgggcacgctcgcacgccgaggtgctggatgtggtgatggatcgggtg
cgggcggatctggcgggcaggccgggggtgcggtcggtggtgctcgcgcacgcgttcgtg
gtcggtggggcggcgacggggtcggagcgctcgatttcggtgggcggcgtggagacggtg
ccgttgtcggcgttcgacggtgtcgattacgtggcgctcgggcatctgcattcgccgcag
acgttgtcggcgtcggtgcggtattcgggttcgccgctgccgtattcgttcggggaggcg
tcgcaccgcaaggcggtgtggatcattgatctggacgagtcgggggtggccgaggtgcgg
cgtcgggatctgccggtggtgcggggtttgagccggttgaccggcacgctcgaggagttg
ctgtccgatccggcgcacgaggacgcggtggcgcattacgtgtcggcgacgttgaccgat
acggcgcgcccgatcgacgcgatgcgccggctgcggaaccggttcccgcatgcggtccac
gtggaatgggttcggccggacgccgattcggtgctgcattatcgggagcgggtgcgcggg
cgcgatgacgcggaggtcgcgcgcagttttctcaccgatgtgcggggtgagccgtcgacg
gcggaattgcggtggctggagcgggcgttggccgcgggtgtcaccgagccggagggtgcc
gcggtgctcgccggatcggatgcggccgaggaattgtcggcgtga
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