Nocardia farcinica IFM 10152: NFA_48130
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Entry
NFA_48130 CDS
T00207
Symbol
glyA
Name
(GenBank) putative serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00260
Glycine, serine and threonine metabolism
nfa00460
Cyanoamino acid metabolism
nfa00630
Glyoxylate and dicarboxylate metabolism
nfa00670
One carbon pool by folate
nfa00680
Methane metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01120
Microbial metabolism in diverse environments
nfa01200
Carbon metabolism
nfa01230
Biosynthesis of amino acids
nfa01240
Biosynthesis of cofactors
nfa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NFA_48130 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NFA_48130 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NFA_48130 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NFA_48130 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NFA_48130 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NFA_48130 (glyA)
Enzymes [BR:
nfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NFA_48130 (glyA)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
SelA
tRNA_synthFbeta
Motif
Other DBs
NCBI-ProteinID:
BAD59665
NIH_Japan:
nfa48130
UniProt:
Q5YQ76
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All DBs
Position
complement(5027484..5028779)
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AA seq
431 aa
AA seq
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MTQTTASVNTQSLGELDPELAAAMAGELARERDTLEMIASENFVPRAVLQAQGSVLTNKY
AEGYPGRRYYGGCENVDVVENLARERAKELFGAEFANVQPHSGAQANAAVLMSLMDPGDR
LLGLDLAHGGHLTHGMRLNFSGKLYEVHSYGVSKEDHRVDMDEVRTIALGAKPKVIVAGW
SAYPRHQDFAAFRAIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGGP
RSGLILAKQEFAKKINSAVFPGQQGGPLMHAIAAKAVAFKIAGTEEFRDRQQRTLSGAKI
LAERLTGADVADKGISVLTGGTDVHLVLVDLRNSQLDGQQGEDLLHEIGITVNRNAVPFD
PRPPMVTSGLRIGTAALATRGFGDAEFTEVADIIATALAGGSDAETLRGRVRALAQRVPL
YQGLEDWHLLG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagacgaccgcctctgtcaatacccagtctctcggtgagctcgatcccgagctc
gcggccgcgatggcaggcgaactcgcccgcgagcgcgacactctcgagatgatcgcctcg
gagaacttcgtgccgcgcgcggtgctgcaggcccagggcagcgtgctgaccaacaagtac
gccgagggttacccggggcgtcgctactacggcggttgcgagaacgtcgacgtcgtcgag
aacctggcccgcgagcgcgccaaggaactgttcggcgccgaattcgccaacgtgcagccg
cattccggcgcgcaggccaacgcggcggtgctgatgtcgctgatggatcccggcgaccgg
ctgctcggcctcgacctcgcgcacggcggccatctcacccacggcatgcggctgaacttc
tccggcaagctctacgaggtgcactcctacggggtgagcaaggaagaccaccgcgtcgac
atggacgaggtgcgcacgatcgcgctcggcgccaagccgaaggtgatcgtcgcgggctgg
tcggcctacccgcgtcaccaggacttcgccgccttccgcgcgatcgccgacgaggtgggt
gcctacctgtgggtggacatggcgcacttcgccggtctcgtcgccgcgggcctgcacccc
tcgccggtgccctacgccgatgtcgtctcctccaccgtgcacaagaccctcggcggtccc
cgctccggcctgatcctggccaagcaggagttcgccaagaagatcaacagcgcggtcttc
cccggccagcagggcggtccgctcatgcacgcgatcgcggccaaggcggtggccttcaag
atcgcgggcaccgaggagttccgcgaccgccagcagcgcaccctgtcgggcgcgaagatc
ctggccgagcggctcaccggcgccgacgtcgccgacaagggcatcagcgtgctcaccggc
ggcaccgacgtgcacctggtgctggtcgatctgcgcaactcccagctcgacggtcagcag
ggcgaggacctgctgcacgagatcggcatcaccgtcaaccgcaacgccgtgccgttcgac
ccccggccgccgatggtcacctccggtctgcggatcggcaccgccgccctggccacccgc
ggcttcggcgacgccgagttcaccgaggtcgccgacatcatcgccaccgcgctggccggc
ggctccgatgcggagacgctgcgcggtcgggtgcgcgcgctggctcagcgcgtgccgctc
taccagggcctggaggattggcacctgctcggctga
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