Nocardia farcinica IFM 10152: NFA_48880
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Entry
NFA_48880 CDS
T00207
Name
(GenBank) hypothetical protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00450
Selenocompound metabolism
nfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NFA_48880
Enzymes [BR:
nfa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NFA_48880
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NFA_48880
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Ortholog
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Gene cluster
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Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAD59740
NIH_Japan:
nfa48880
UniProt:
Q5YQ01
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All DBs
Position
5102081..5103259
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AA seq
392 aa
AA seq
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MLDDTRVRADTPGLAADPDLVFLDSAGSSLPPRVVLDTQVAHLRRETEIGGYRAAAERLD
DLAGVKTAIGELINADPDCVALSDSASRAWADFFYSVPLRPGDRVLISGADYASNAIAAL
QRARATGAVVEQIPSDDTGQLDLDALERMVDERVALVSLLHVPTNGGLVNPAAEATKIAH
SAGAMVLLDACQSAGQLPLDVAELGVDALSATGRKWLRGPRGTGFLYVRPELATTMEPQR
LDLHSAAWTGPQDYELAPDARRFEFWECDVAARLGLGAAVRYLLDLGPADVYAAIAERAG
HLREAFAALPRVTVRDNGVRRGGIVSFTVDGVPATEVRDRLAAQNITVTVSFAGSTLLDM
SARGLDAVVRASPHCFVGFDELDRFVRAVAEL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgacacacgcgtgcgggccgacacccccgggctggccgccgaccccgacctg
gtcttcctcgacagcgccggctcctcgctcccgccgcgggtggtgctggacacccaggtc
gcgcacctgcgccgggaaaccgagatcggcggctaccgcgccgccgccgaacgcctcgac
gacctggccggggtgaagaccgcgatcggcgagctgatcaacgccgacccggattgcgtg
gcactcagcgacagcgccagccgcgcctgggcggacttcttctactcggtgccgctgcgc
cccggcgaccgcgtgctgatcagcggcgccgactacgccagcaacgcgatcgccgcgctg
cagcgagcccgcgccaccggcgccgtcgtcgagcagatccccagcgacgacaccggccag
ctggacctggacgcgctggagcggatggtcgacgagcgggtcgcgctggtctcactgctg
catgtgccgaccaacggtgggctggtgaaccccgccgccgaggcgacgaagatcgcgcac
tcggcgggcgcgatggtgctgctggacgcctgccagtcggccgggcagctgcccctcgac
gtcgccgagctcggtgtcgacgcgctctcggcgaccggccgcaagtggttgcgcggcccg
cggggcaccggattcctctatgtccgaccggaattggcgacgacgatggaaccgcagcgg
ctggacctgcacagcgccgcctggaccggcccgcaggactacgaactcgcacccgacgcc
cgccgcttcgaattctgggagtgcgatgtcgccgcgcggctcggcctgggtgcggcggtg
cgctacctgctcgacctcggcccggccgacgtgtacgccgcgatcgccgagcgggccggg
cacctgcgcgaggcgttcgccgcgctgccgcgggtcacggtgcgcgacaacggcgtccgc
cgcggcggcatcgtctccttcaccgtcgacggcgtgcccgccaccgaggtgcgcgaccgg
ctggccgcgcagaacatcaccgtcaccgtgagcttcgccgggtccacgttgctggacatg
agcgcccgcgggctcgacgccgtggtgcgcgcctcaccgcactgcttcgtcggcttcgac
gagctggaccggttcgtccgcgcggtcgcggagctgtag
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