Nocardia farcinica IFM 10152: NFA_49060
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Entry
NFA_49060 CDS
T00207
Symbol
metS
Name
(GenBank) putative methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00450
Selenocompound metabolism
nfa00970
Aminoacyl-tRNA biosynthesis
nfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NFA_49060 (metS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NFA_49060 (metS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nfa01007
]
NFA_49060 (metS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfa03016
]
NFA_49060 (metS)
Enzymes [BR:
nfa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
NFA_49060 (metS)
Amino acid related enzymes [BR:
nfa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
NFA_49060 (metS)
Transfer RNA biogenesis [BR:
nfa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NFA_49060 (metS)
Prokaryotic type
Other AARSs
NFA_49060 (metS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
BAD59758
NIH_Japan:
nfa49060
UniProt:
Q5YPY3
LinkDB
All DBs
Position
5120677..5122233
Genome browser
AA seq
518 aa
AA seq
DB search
MSADAPAFYVTTAIAYPNGAPHIGHAYEYISADAIARFKRLDGYDVFFMTGTDEHGQKMQ
QAAAAEGIPVQDLAARNSDVFERLDKALDVSYDRFIRTTDADHRAASVAIWERMLANGDI
YLDNYAGWYSVRDEAFYTEEETTLLEDGSRISTETKTPVTWTEESNFFFRLSKYQDRLLA
HYEEHPEFIAPATRRNEIVSYVKAGLKDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNY
LTGVGFPDTDSPAFRKFWPADVHIIGKDITRFHTVYWPAFLMSAGVPLPKRVFVHGFLYN
KGEKMSKSVGNVVDPLELVDEYGLDAVRFFLLREISYGQDGSYSHDAIVARINADLANEF
GNLVQRSLTMVHKNCDAAVPTPGEFTAEDRALLDRAAGLLERCRAEFDAQQMHLALEAIW
LTLGETNRYFSAQQPWALRKSGTEADLARMATVLYVTLEVVRIVAILVQPVMPGSAGRIL
DLLAQQGRTFADLATPLTPGTPLPAPEPVFPRYVEPKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggacgcaccagccttctacgtcaccacggccatcgcctacccgaacggcgcg
ccgcacatcgggcatgcctacgagtacatctcggcggacgccatcgcccggttcaagcgg
ctcgacggctacgacgtgttcttcatgaccggcaccgacgagcacggtcagaagatgcaa
caggccgccgccgccgagggcatcccggtccaggacctggccgcacgcaactccgacgtg
ttcgagcggctcgacaaggccctcgacgtctcctacgaccgcttcatccgcaccaccgac
gccgaccatcgggcggccagcgtggcgatctgggagcggatgctcgccaacggcgacatc
tacctggacaactacgcgggctggtactcggtgcgcgacgaagcgttctacaccgaggag
gagaccacgctgctcgaggacggcagccgcatctccaccgagaccaagacgccggtcacc
tggaccgaggagtcgaacttcttcttccggctctccaagtaccaggaccggctgctggcc
cactacgaggagcatccggagttcatcgcgcccgccacgcggcgcaacgagatcgtcagc
tacgtcaaggcggggctgaaggatctgtccatctcgcgcaccaccttcgactggggcgtg
ccggtgcccggccaccccgaccacgtcatgtacgtgtgggtggacgcgctcaccaattac
ctgactggcgtgggcttcccggacaccgattccccggcgttccgcaagttctggcccgcc
gacgtgcacatcatcggcaaggacatcacccgcttccacacggtgtactggcccgccttc
ctgatgtcggccggcgtgccgctgcccaagcgggtcttcgtacacggcttcctgtacaac
aagggcgagaagatgtcgaagtcggtcggcaacgtggtcgacccgctcgaactcgtcgac
gagtacggcctggacgcggtgcgcttcttcctgctgcgggagatctcctacggccaggac
ggcagctacagccacgacgcgatcgtcgcccgcatcaacgccgacctggccaacgaattc
ggcaacctggtgcagcgcagcctgacgatggtgcacaagaactgtgacgccgcggtgccg
acgcctggcgagttcaccgcggaggaccgggcgctgctcgatcgcgcggccggcctgctg
gagcgctgccgcgccgaattcgacgcccagcagatgcatctggcgctggaagcgatctgg
ctgaccctcggcgagaccaaccggtacttctccgcgcagcagccgtgggcgttgcgcaag
tccggcaccgaggcggatctggccaggatggcgaccgtgctctatgtgacgctcgaggtc
gtgcgcatcgtcgcgatcctggtgcagccggtgatgccgggctcggcgggccgcattctg
gacctgctcgcccagcagggccgcaccttcgccgacctggccaccccgctcacgcccggc
accccgctgcccgcgcccgagccggtcttcccacgctacgtcgaacccaaggagtga
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