Nocardia farcinica IFM 10152: NFA_50160
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Entry
NFA_50160 CDS
T00207
Name
(GenBank) putative transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
NFA_50160
Transcription factors [BR:
nfa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NFA_50160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Rrf2
HTH_Crp_2
wHTH-PRTase_assc
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BAD59868
NIH_Japan:
nfa50160
UniProt:
Q5YPM3
LinkDB
All DBs
Position
5230185..5231621
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AA seq
478 aa
AA seq
DB search
MLDELPIVLDRESPRPLAVQVADALRAAATGGLLRAGDRLPSTRALAQRLAISRSVTAAA
YEQLHAEGWIDGRRGSGTYLTTAPAAAPARRDGSTAGTPPGRRYDFAPGAPCVDALDRAA
WRRAWRAAADHPPLVRKDRAGDPAYRAAVADHLLRHRGLVAGADTVVLATAGTSAAVGEL
AAALLRPGDAVAVENPGYQRAIGAFRAAGVRVCPVPVDEHGLRVDRIPAGVRAVYCTPAH
QFPLGARMPAARRVQLIEHARRTGALVVEDDYDGELRYDTAPLPLLAALAPDVVVHLGTT
SKILSPTLGVGWLVAAPPVAAAVLAHRERTGTSPSPAGQAMLAEFARHGDLARHLRRLRR
TVAPRRELVVTALRERGLTVVGDDAGSHVVVPLPGAAAERAAVRAGAAAGLGFDALGQHH
LDGEHQPDEHQPGGERTYGIPLGYTALAWADLVAAVPVAAKCLAEAAAEGPAGRPTPP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgagttgccgatcgtcctcgaccgcgagagcccgcggccgctggccgtgcag
gtggccgacgccctgcgcgccgccgccaccggcggcctgctgcgcgcgggcgatcggctg
ccgtccaccagggcgttggcccagcggctcgcgatcagccgcagcgtgaccgccgcggcc
tacgagcagttgcacgcggagggctggatcgacgggcgtcgcggctcgggcacctatctg
accacggccccggccgccgcaccggcgcgtcgcgacggctcgaccgccggcacgccaccg
ggccgccgctacgacttcgcgcccggcgcgccctgcgtcgacgcactcgaccgggcggcg
tggcggcgcgcgtggcgggcggcggcggaccatccgccactcgtgcgcaaggaccgcgcg
ggcgacccggcctaccgggcggcggtggccgaccatctgctgcggcaccgcgggctggtg
gcgggcgcggacaccgtggtgctggccaccgcgggtaccagcgcggcggtcggcgaactc
gcggcggcgctgctgcggcccggtgacgccgtcgccgtggagaaccccggctatcagcgg
gcgatcggcgcgttccgcgcggcgggggttcgggtgtgcccggtgccggtggacgaacac
ggtctgcgggtggaccggattccggcgggggtgcgcgcggtgtattgcacaccggcccat
cagtttccgctcggcgcgcggatgcccgcggcgcggcgggtgcagctgatcgaacatgcc
cggcgcaccggcgcgctggtcgtcgaggacgactacgacggcgagctccgctacgacacc
gcaccgctgccgctgctcgccgcgctcgcgccggacgtggtggtgcatctgggcaccacg
agcaagatcctgtccccgacgctgggcgtgggctggctggtcgccgcgccgcccgtcgcc
gccgccgtgctcgcgcaccgggagcgtacgggcacctcgccgagcccggcggggcaggcg
atgctggccgagttcgcccggcacggcgacctcgcccggcatctgcgccgcctgcgccgt
accgttgcgccgcgccgcgaactcgtggtcaccgcgctgcgcgagcgcgggctcaccgtc
gtcggcgacgacgcgggctcgcacgtggtggtcccgctgcccggcgcggccgccgaacgc
gccgccgtgcgcgcgggcgcggccgccggcctgggtttcgacgcgctcgggcagcaccat
ctcgacggcgagcaccagcccgacgagcaccagcccggcggcgagcgcacctacggcatc
ccgctcggctacaccgcgctggcctgggccgacctggtcgcggccgtgccggtggcggcg
aaatgcctggccgaggcggccgccgagggccctgccgggaggccgacaccgccgtag
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