Nocardia farcinica IFM 10152: NFA_52750
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Entry
NFA_52750 CDS
T00207
Symbol
groEL2
Name
(GenBank) putative chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFA_52750 (groEL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfa03019
]
NFA_52750 (groEL2)
03110 Chaperones and folding catalysts [BR:
nfa03110
]
NFA_52750 (groEL2)
03029 Mitochondrial biogenesis [BR:
nfa03029
]
NFA_52750 (groEL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfa04147
]
NFA_52750 (groEL2)
Enzymes [BR:
nfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NFA_52750 (groEL2)
Messenger RNA biogenesis [BR:
nfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NFA_52750 (groEL2)
Chaperones and folding catalysts [BR:
nfa03110
]
Heat shock proteins
HSP60 / Chaperonin
NFA_52750 (groEL2)
Mitochondrial biogenesis [BR:
nfa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NFA_52750 (groEL2)
Exosome [BR:
nfa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NFA_52750 (groEL2)
Exosomal proteins of other body fluids (saliva and urine)
NFA_52750 (groEL2)
Exosomal proteins of breast cancer cells
NFA_52750 (groEL2)
Exosomal proteins of colorectal cancer cells
NFA_52750 (groEL2)
Exosomal proteins of bladder cancer cells
NFA_52750 (groEL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAD60127
NIH_Japan:
nfa52750
UniProt:
Q9AFA6
LinkDB
All DBs
Position
complement(5576327..5577952)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTAKLLDTAKEVETKEQIAATAGISAGDASIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVGSKVSTVKDLLPLLEKVIQ
AGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGIELLGQARKVVVTKDETTIVEGAGDAEAIKGRVAQIRTEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
APALDELKLTGDEATGANIVRVALSAPLKQIAFNAGLEPGVVAEKVSNLEAGHGLNADSG
EYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacaattgcgtatgacgaagaggcccgccgcggcctcgagcgcggtctgaac
agcctcgccgacgcggtcaaggtgacgctgggccccaagggtcgcaacgttgtcctggag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctggaggatccctacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacc
gacgacgtcgcgggcgacggcaccaccaccgccaccgtgctcgcccaggcgctggtgcgc
gagggtctgcgcaacgtggccgcgggcgcgaacccgctgggcctcaagcgcggcatcgag
aaggccgtcgaggccgtgaccgccaagctgctcgacaccgccaaggaggtcgagaccaag
gagcagatcgccgccaccgcgggcatctccgcgggcgacgcgtccatcggtgagctgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctccagctggagctgaccgagggcatgcgcttcgacaagggctacatctccggc
tacttcgtgaccgatcccgagcgtcaggaagcggtcctcgaggatccctacatcctgctc
gtcggctcgaaggtctccaccgtcaaggacctgctgccgctgctggagaaggtcatccag
gccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtgaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggctcagctggccgacatcgccatcctgaccggtggcgaggtcatcagc
gaagaggtcggcctctcgctggagaccgcgggcatcgagctgctcggccaggctcgcaag
gtcgtcgtgaccaaggacgagaccaccatcgtcgagggcgcgggcgacgccgaggcgatc
aagggccgggtcgcgcagatccgcaccgagatcgagaactccgactccgactacgaccgc
gagaagctgcaggagcggctggccaagctggccggcggcgtggccgtcatcaaggcgggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcc
gccccggccctggacgagctgaagctgaccggtgacgaggccaccggcgcgaacatcgtg
cgcgtcgctctctcggctccgctgaagcagatcgccttcaacgccggcctcgagcccggc
gtggtcgccgagaaggtctcgaacctggaggccggccacggcctgaacgccgactcgggc
gagtacgaggacctgctggccgccggcgtcgccgacccggtcaaggtcacccgctcggcg
ctgcagaacgcggcctccatcgcggccctgttcctcaccaccgaggccgtcgtcgccgac
aagccggagaaggccgccgctcccgccggcgacccgaccggtggcatgggcggcatggac
ttctga
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