Nocardia farcinica IFM 10152: NFA_53160
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Entry
NFA_53160 CDS
T00207
Symbol
thiC
Name
(GenBank) putative thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00730
Thiamine metabolism
nfa01100
Metabolic pathways
nfa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NFA_53160 (thiC)
Enzymes [BR:
nfa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NFA_53160 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAD60168
NIH_Japan:
nfa53160
UniProt:
Q5YNS3
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All DBs
Position
5617123..5618766
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AA seq
547 aa
AA seq
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MASADRVTAPVDTVTTGPIEGSVKHYREVDGLRIPVRRINLTNGETFDVYDTSGPYTDEN
ATIDLEAGLPKLRDSWDKPTVAGPRTQLAWARAGIVTPEMRFIAAREGVEPELVRAEVAA
GRAVIPANHNHPELEPTIIGKKFLVKINANIGNSAVSSSIAEEVEKMVWATRWGADTIMD
LSTGKNIHETREWILRNSPVPVGTVPIYQALEKVNGDPAALTWEIYRDTVIEQAEQGVDY
MTVHAGVLLRYVPLTAKRVTGIVSRGGSIMAAWCLAHHRESFLYTHFEELCEILARYDVT
FSLGDGLRPGSVADANDEAQFAELRTLGELTKIAKSHGVQVMIEGPGHVPMHKIVENVRL
EEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAIIAQAGTAMLCYVTPKEHLGLPNRDD
VKTGVITYKIAAHAADLAKGHPHAQQRDDALSKARFEFRWRDQFALSLDPDTAREYHDET
MPAEPAKTAHFCSMCGPKFCSMRISADVREYAEANNLTDVAAIEAGMAAKSAEFAESGGK
VYLPVVS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgccgatcgcgtcaccgcacccgtcgacaccgtcaccaccggccccatcgag
ggcagcgtcaagcactaccgcgaggtggacgggctccgaatcccggtgcggcgcatcaat
ctcaccaacggcgagaccttcgacgtgtacgacacctcgggcccgtacaccgacgagaac
gccaccatcgacctggaggccggtctgcccaagctgcgcgacagctgggacaagccgacc
gtcgcgggcccgcgcacccagctcgcctgggcccgcgccggcatcgtcaccccggagatg
cgcttcatcgccgcccgcgagggcgtcgaaccggaactggtgcgcgcggaggtggcggcc
ggtcgtgccgtcatcccggccaaccacaaccatcccgaactcgagccgaccatcatcggc
aagaagttcctggtgaagatcaacgccaacatcggcaactcggcggtctcctcttcgatc
gccgaggaggtggagaagatggtgtgggccacccgctggggcgccgacaccatcatggac
ctgtccaccggcaagaacatccacgagacccgcgagtggatcctgcgcaactcgccggtg
ccggtcggcaccgtgccgatctaccaggcgctggagaaggtcaacggcgatccggccgcg
ctcacctgggagatctaccgcgacaccgtgatcgagcaggccgagcagggcgtggactac
atgaccgtgcacgcgggcgtactgctgcgctacgtgccgttgaccgccaagcgcgtcacc
ggcatcgtctcgcgtggcggctcgatcatggcggcctggtgcctggcgcaccatcgggag
tcgttcctgtacacccatttcgaggaactgtgcgagatcctggcccgctacgacgtcacc
ttctccctcggcgacggcctgcggcccggctccgtcgccgacgccaacgacgaggcgcag
ttcgccgagctgcgcaccctcggtgaactcaccaagatcgcgaaatcccatggcgtgcag
gtgatgatcgaaggccccggccatgtgccgatgcacaagatcgtggagaacgtgcggctc
gaggaggagctgtgcgaggaggcgccgttctacaccctcggcccgctggccaccgacatc
gcacccgcctacgaccacatcacctcggccatcggcgccgcgatcatcgcccaggcgggc
accgcgatgctctgctacgtcacccccaaggagcatctgggcctgcccaaccgcgacgac
gtgaagaccggcgtgatcacctacaagatcgccgcgcacgccgccgacctggccaagggc
cacccgcacgcccagcagcgcgacgacgcgctgtccaaggcgcgcttcgagttccgctgg
cgcgaccagttcgcgctctcgctcgatcccgacaccgcgcgcgagtaccacgacgagacg
atgcccgccgagcccgccaagaccgcgcacttctgctcgatgtgcggcccgaagttctgc
tcgatgcgcatctccgccgacgtccgcgagtacgccgaggccaacaacctcaccgacgtc
gcggccatcgaggccggcatggccgccaagtccgccgagttcgccgaatccggcggcaag
gtctacctgcccgtcgtgtcctga
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