Nocardia farcinica IFM 10152: NFA_54020
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Entry
NFA_54020 CDS
T00207
Symbol
clpB
Name
(GenBank) putative Clp protease ATP-binding subunit
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nfa03110
]
NFA_54020 (clpB)
Chaperones and folding catalysts [BR:
nfa03110
]
Heat shock proteins
HSP100
NFA_54020 (clpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
NBD_SMAX1
Sigma54_activat
ATPase_2
nSTAND3
AAA_23
TniB
AAA_7
AAA_14
Mg_chelatase
IstB_IS21
Zeta_toxin
T2SSE
bpMoxR
AAA_3
NACHT
AAA_24
ResIII
HOOK
DNA_pol3_delta2
AAA_25
DUF8429
KefB_C
Motif
Other DBs
NCBI-ProteinID:
BAD60254
NIH_Japan:
nfa54020
UniProt:
Q5YNI7
LinkDB
All DBs
Position
complement(5704757..5707318)
Genome browser
AA seq
853 aa
AA seq
DB search
MDSFNPTTKTQAALTAALQAASAAGNPEIRPAHLLVALLDQTDGIAAPLLKAVGVDPATV
RREAQDLVDRLPRATGATTQPQLGREALAAITAAQRLATELGDEYVSTEHVLVGLADGDS
DVTMLLKKYGATADALREAFTTVRGSARVTTPDPEATYQALEKYSTDLTEAARTGKLDPV
IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKKVISL
DLGAMVAGAKYRGEFEERLKAVLEDIKNSAGQIITFIDELHTIVGAGATGESAMDAGNMI
KPMLARGELRLVGATTLEEYRQHIEKDAALERRFQQVLVGEPSVEDTVGILRGIKERYEV
HHGVRITDSALVAAAALSDRYITSRFLPDKAIDLVDESASRLRMEIDSRPVEIDEVERAV
RRLEIEEVALSKETDEASKLRLEKLRQELADDREKLNQLMTRWQNEKSAIDQVRTLKEQL
EALRGESERAERDGDLGKAAELRYGRIPSLEKQLAEAEKASGAAADGEVMLKEEVGPDDI
AEVVSSWTGIPVGRLLEGETQKLLRMEDELGRRVVGQKEAVQAVSDAVRRARAGVADPNR
PTGSFMFVGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHAVARLVGAPPGYVGY
DQGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILIL
TSNLGAGGDQEFVMNAVRAAFKPEFLNRLDDVVMFHALDEEQLEHIVDIQLEQLQKRLAQ
RRLTLDVTGSARFWLAVRGYDPVYGARPLRRLIQQAIGDTLAKELLAGTVTDGDTVKVGV
SPDGDNLVVEPAS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtggactcgttcaaccccaccaccaagacccaggcggccctgaccgcggccttgcaggcc
gcctcggccgcgggcaacccggagatccggcccgcacacctgttggtggcgttgctggat
cagaccgacggcatcgccgcaccgctgctcaaggccgtcggggtggacccggcgacggtg
cggcgggaggcgcaggacctcgtcgaccggctgccccgcgccaccggcgcgaccacccag
ccgcagctgggccgggaggcgctggccgccatcaccgccgcgcagcggctggcgaccgaa
ctcggtgacgagtacgtctccaccgaacacgtcctggtggggctggccgacggcgattcc
gacgtcacgatgctgctgaagaagtacggcgccaccgccgacgcgctgcgcgaggcattc
acgaccgtgcgcggcagcgcgcgcgtcaccacgcccgaccccgaggccacctaccaggcg
ctggagaagtactccaccgatctcaccgaggccgcgcgcaccggcaagctcgatccggtg
atcggccgggacaccgagatccgccgcgtcgtgcaggtgctgagccggcgcaccaagaac
aacccggtgctgatcggtgagcccggcgtcggcaagaccgcgatcgtggaggggctcgcc
cagcgcatcgtggccggtgacgtgccggagtcgctgcgcggcaagaaggtgatctcgctg
gatctgggcgcgatggtggcgggtgcgaagtaccgcggcgagttcgaggagcggctcaag
gccgtgctcgaggacatcaagaacagcgcgggccagatcatcacgttcatcgacgagctg
cacaccatcgtcggcgcgggcgcgaccggcgaatcggcgatggacgcgggcaacatgatc
aagccgatgctggcgcgcggtgagctgcggctggtcggcgcgaccacgctggaggagtac
cgccagcacatcgagaaggacgccgcgctcgagcggcgcttccagcaggtgctggtcggt
gagccctcggtggaggacaccgtcggcatcctgcgcggcatcaaggagcgctacgaggtg
caccacggcgtgcggatcaccgactcggcgctggtggccgcggcggcgctgtccgaccgc
tacatcacctcgcgtttcctgccggacaaggcgatcgacctggtcgacgagtccgcttcc
cggctgcgcatggagatcgactcccgcccggtcgagatcgacgaggtcgagcgcgcggtg
cggcggctggagatcgaagaggtcgcgctgagcaaggagaccgacgaggcctccaagttg
cggctggagaagctgcgccaggaactggccgacgaccgggagaagctgaaccagctgatg
acccggtggcagaacgagaagagcgctatcgaccaggtccgcacgctcaaggaacagctc
gaggcgctgcgcggggagtccgagcgggccgagcgcgacggcgatctgggcaaggccgcc
gagctgcgctacggccgcatccccagtctggagaagcagctggccgaggccgagaaggcc
tccggtgcggccgccgacggcgaggtgatgctcaaggaggaggtcggccccgacgacatc
gccgaggtggtgtcctcctggaccggcattccggtcggcaggctgctcgagggtgagacc
cagaagctgctgcggatggaggacgagctgggccgtcgcgtggtcggacagaaggaggcc
gtgcaggcggtgtcggacgcggtgcgccgggcgcgggccggagtcgccgacccgaaccgg
ccgaccggctcgttcatgttcgtcggaccgaccggcgtcggcaagaccgagctggccaag
gcgctggccgacttcctgttcgacgacgagcgcgcgatggtgcgtatcgacatgagcgag
tacagcgagaagcacgcggtggctcgcctggtcggcgcgcctcccggctacgtcggctac
gaccagggcggccagctcaccgaggcggtgcggcgcaggccgtacacggtggtgctgttc
gacgagatcgagaaggcgcacccggacgtcttcgacatcctgctgcaggtgctcgacgag
ggcaggttgaccgacggccagggccgcacggtcgacttccgcaacaccatcctcatcctc
acctccaacctgggcgcgggtggtgaccaggagttcgtcatgaacgcggtgcgggccgcc
ttcaagccggagttcctcaaccggctcgacgacgtggtcatgttccacgcgctcgacgag
gaacagctcgagcacatcgtcgacatccagctcgagcagctgcagaagcgcctggcgcag
cggcggctcaccctcgatgtcaccggctcggcgcggttctggctggcggtgcgcggctac
gaccccgtctacggcgcgcggccactgcgcaggctgatccagcaggccatcggcgacacc
ctcgccaaggaactgttggcgggcaccgtcaccgacggcgacaccgtcaaggtgggtgtc
agccccgacggcgacaacctggtcgtcgaaccggcgtcctga
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integrated database retrieval system
