Nocardia farcinica IFM 10152: NFA_54090
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Entry
NFA_54090 CDS
T00207
Symbol
dnaK
Name
(GenBank) putative heat shock protein
KO
K04043
molecular chaperone DnaK
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFA_54090 (dnaK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfa03019
]
NFA_54090 (dnaK)
03110 Chaperones and folding catalysts [BR:
nfa03110
]
NFA_54090 (dnaK)
03029 Mitochondrial biogenesis [BR:
nfa03029
]
NFA_54090 (dnaK)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfa04147
]
NFA_54090 (dnaK)
Messenger RNA biogenesis [BR:
nfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NFA_54090 (dnaK)
Chaperones and folding catalysts [BR:
nfa03110
]
Heat shock proteins
HSP70 / DNAK
NFA_54090 (dnaK)
Mitochondrial biogenesis [BR:
nfa03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
NFA_54090 (dnaK)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
NFA_54090 (dnaK)
Exosome [BR:
nfa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NFA_54090 (dnaK)
Exosomal proteins of breast cancer cells
NFA_54090 (dnaK)
Exosomal proteins of colorectal cancer cells
NFA_54090 (dnaK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
Motif
Other DBs
NCBI-ProteinID:
BAD60261
NIH_Japan:
nfa54090
UniProt:
Q5YNI0
LinkDB
All DBs
Position
complement(5713524..5715371)
Genome browser
AA seq
615 aa
AA seq
DB search
MARAVGIDLGTTNSVVAVLEGGEPVVVANSEGSRTTPSIVAFAKNGEVLVGQPAKNQAVT
NVDRTIRSVKRHIGTDWTVEIDGKKYTPQEISARTLMKLKRDAEAYLGEEITDAVITVPA
YFEDAQRQATKEAGQIAGLNVLRIVNEPTAAALAYGLDKGDKEQTILVFDLGGGTFDVSL
LEIGEGVVEVRATSGDNHLGGDDWDQRIVNWLVDKFKASSGIDLTKDKMAMQRLREAAEK
AKIELSSSQSTSINLPYITVDADKNPLFLDEQLSRAEFQKITSDLLDRTRAPFQQVIKDA
GISVSDIDHVVLVGGSTRMPAVSDLVRELTGGKEPNKGVNPDEVVAVGAALQAGVLKGEV
KDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGERE
IAAHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSG
LSKEEIDRMIKDAEQHAAEDKARREEAETRNQAETLVHQTEKFIKDNEDKVPADVKSKVE
AAIAEANEALAGTDIAAVKAAVEKLATESQALGQAIYEAQGADAAASSNGAASSANDDQV
VDAEVVDEPVDTEKK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgcggtcggaatcgacctcgggaccacgaactcggtcgtcgccgttctcgaa
ggtggtgagccggtcgtcgtcgccaactccgaaggttcgcgtaccacgccctcgatcgtc
gccttcgccaagaacggtgaagtcctggtcggccagcctgccaagaaccaggcggtcacc
aacgtcgatcgcaccatccggtcggtcaagcgccacatcggcaccgactggaccgtcgag
atcgacggcaagaagtacaccccccaggagatcagcgcgcgcacgctgatgaagctcaag
cgcgacgcggaagcctacctcggtgaggagattaccgacgcggtgatcaccgttcccgcc
tacttcgaggacgcccagcgccaggccaccaaggaagccggccagatcgccggcctgaac
gtgctgcgcatcgtcaacgagccgaccgcggccgcgctggcctacggcctggacaagggc
gacaaggaacagaccatcctggtcttcgacctcggtggtggcaccttcgacgtctcgctg
ctcgagatcggcgagggcgtcgtcgaggtccgcgccacctccggtgacaaccacctcggt
ggtgacgactgggatcagcgcatcgtcaactggctggtcgacaagttcaaggccagctcg
ggcatcgacctgaccaaggacaagatggccatgcagcggctgcgggaagccgccgagaag
gccaagatcgagctcagctcctcgcagagcacctcgatcaacctgccctacatcaccgtc
gacgccgacaagaacccgctgttcctcgacgagcagctctcgcgcgcggagttccagaag
atcacctccgatctgctcgaccgcacccgtgcgccgttccagcaggtcatcaaggacgcg
gggatcagcgtctccgacatcgaccacgtggtcctcgtcggtggctcgacccgtatgccc
gccgtctccgacctggtgcgcgagctgaccggtggcaaggagcccaacaagggcgtgaac
ccggacgaggtcgtcgccgtcggcgccgccctgcaggccggtgtgctcaagggtgaggtc
aaggacgtcctgctgctcgacgtgaccccgctgtcgctgggtatcgagaccaagggcggc
gtgatgaccaagctcatcgagcgcaacaccacgatcccgaccaagcgttcggagaccttc
accaccgccgacgacaaccagccgtcggtgcagatccaggtcttccagggcgagcgcgag
atcgccgcgcacaacaagctgctgggttccttcgagctcaccggcatcccgccggctccg
cgcggcgtgccccagatcgaggtgaccttcgacatcgacgccaacggcatcgtgcacgtc
accgcgaaggacaagggcaccggcaaggagaacacgatcaagatccaggacggctccggc
ctgtccaaggaagagatcgaccggatgatcaaggacgccgagcagcacgcggccgaggac
aaggcccggcgcgaggaggccgagacccgcaaccaggccgagaccctggtgcaccagacc
gagaagttcatcaaggacaacgaggacaaggtgcccgcggacgtcaagtccaaggtcgag
gccgccatcgccgaggcgaacgaggccctcgcgggcaccgacatcgccgcggtgaaggcc
gccgtggagaagctggccaccgagtcgcaggccctcggccaggcgatctacgaggcgcag
ggcgccgacgccgccgcgtccagcaacggtgccgcgagctccgcgaacgatgaccaggtc
gtggatgccgaggtcgtggacgagccggtcgacacggagaagaagtga
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