Nocardia farcinica IFM 10152: NFA_56020
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Entry
NFA_56020 CDS
T00207
Name
(GenBank) putative succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00020
Citrate cycle (TCA cycle)
nfa00190
Oxidative phosphorylation
nfa00650
Butanoate metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01120
Microbial metabolism in diverse environments
nfa01200
Carbon metabolism
Module
nfa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nfa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nfa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NFA_56020
00650 Butanoate metabolism
NFA_56020
09102 Energy metabolism
00190 Oxidative phosphorylation
NFA_56020
Enzymes [BR:
nfa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NFA_56020
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
GIDA
Thi4
I_LWEQ
Pyr_redox_3
FAD_oxidored
Lycopene_cycl
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
BAD60454
NIH_Japan:
nfa56020
UniProt:
Q5YMY7
LinkDB
All DBs
Position
5939896..5941836
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AA seq
646 aa
AA seq
DB search
MPEVERHNYDVVVIGAGGAGLRAVIEARERGLSVAVVCKSLFGKAHTVMAEGGCAASMGN
ANEKDTWQTHFKDTMRGGKFLNNWRMAELHAQEAPDRVWELESYGALFDRTADGRISQRN
FGGHTYPRLAHVGDRTGLEIIRTMQQKIVALQQEDHAATGDYEARIKVFAECTVTELLTD
SGRIAGAFGYWRESGKFVLFEAPAVVLATGGIGKSYKVTSNSWEYTGDGHALALRAGATL
INMEFLQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPGVFKGQYAETE
AEADQWLKDNDSARRTPDLLPRDEVARAINEEVKAGRGTEHGGVFLDIASRLPAEEIKRR
LPSMYHQFKELADVDITKEPMEVGPTCHYVMGGIEVDPDTGAASVPGLFAAGECSGGMHG
SNRLGGNSLSDLLVFGRRAGLGAAAYVEQLDARPQVSDAGVAAAARTAVAPFDPPADGRG
ENPYTLHTDLQQVMNDLVGIIRKEHELEQAIERLGELRERFANVTVEGHRQFNPGWHLAL
DLRNMLLVSECVAQAALQRTESRGGHTRDDYPTMDPAWRNKLLVCAVDPDDAEAVVPRVR
VTPKDQTPMRPDLLALFDLAELEKYYHSAELAGHPAGAGPATEGEA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagtggaacggcacaactacgacgtggtggtcatcggggcgggcggcgcgggc
ctgcgcgcggtcatcgaggcgcgcgagcgcggcctgtcggtggcggtggtgtgcaagtcg
ctgttcggcaaggcgcacacggtgatggccgagggcggctgcgcggcctcgatgggcaac
gccaacgagaaggacacctggcagacccacttcaaggacaccatgcgcgggggcaagttc
ctcaacaactggcgcatggccgagctgcacgcgcaggaggcgccggaccgggtctgggag
ctggaatcctacggggcactgttcgaccggaccgccgacggccggatcagccaacgcaac
ttcggcgggcacacctacccgcgcctggcgcacgtgggcgaccgcaccggcctcgagatc
atccgcaccatgcagcagaagatcgtggcgctgcagcaggaggaccacgccgcgaccggc
gactacgaggcgcggatcaaggtcttcgccgaatgcaccgtcaccgagctgttgaccgat
tccggccgcatcgcgggcgcgttcgggtactggcgggagtcgggcaagttcgtgctgttc
gaggcgcccgcggtggtgctggccaccggcggcatcggcaagtcctacaaggtcacctcg
aactcgtgggagtacaccggtgacgggcacgcgctggcactgcgcgcgggcgcgaccctg
atcaacatggagttcctgcagttccacccgaccggcatggtctggccgccgagcgtcaag
ggcatcctggtcaccgagggcgtgcgcggcgacggcggggtgctgaagaactccgagggc
aagcgcttcatgttcgactacatcccgggggtcttcaagggccagtacgccgagaccgag
gccgaggccgatcagtggttgaaagacaacgactcggcccgccgcacccccgacctgctg
ccgcgcgacgaggtcgcccgggcgatcaacgaggaggtcaaggccgggcgcggcaccgag
cacggcggcgtgttcctcgacatcgcctcgcggctgcccgccgaggagatcaagcgcagg
ttgccgtcgatgtaccaccagttcaaggagctggccgacgtcgacatcaccaaggagccg
atggaggtcgggccgacctgtcattacgtcatgggcggtatcgaggtggacccggacacc
ggcgcggcgagcgtgcccggcctgttcgcggccggtgagtgctcgggcggcatgcacggt
tccaaccggctcggcggcaactcgctgtcggacctgttggtgttcggccggcgcgccggg
ctgggcgccgccgcctatgtcgagcagctcgacgcgcggccgcaggtctcggacgcgggg
gtggccgcggcggcgcgtaccgccgtcgcgccgttcgatccgcccgcggacgggcgcggg
gagaacccctacaccctgcacaccgatctgcagcaggtgatgaacgacctggtcggcatc
atccgcaaggagcacgaactcgagcaggcgatcgagcggctgggcgagctgcgggagcgc
ttcgccaacgtcaccgtcgagggccatcggcagttcaacccgggctggcatctggcgctc
gacctgcgcaacatgctgctggtcagcgaatgcgtggcgcaggcggcactgcagcggacc
gagagccgcggcgggcacacccgcgacgattacccgacgatggacccggcctggcgcaac
aagctgctggtgtgcgcggtcgatccggacgacgccgaggccgtcgtgccgcgggtgcgg
gtgacgccgaaggatcagacgccgatgcgcccggacctgctcgcgctcttcgacctggcc
gaactcgagaagtactaccactcggccgaactcgcggggcatcccgccggcgcgggaccg
gccacggaaggtgaggcctga
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