Nocardia farcinica IFM 10152: NFA_8390
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Entry
NFA_8390 CDS
T00207
Symbol
truA
Name
(GenBank) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfa03016
]
NFA_8390 (truA)
Enzymes [BR:
nfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NFA_8390 (truA)
Transfer RNA biogenesis [BR:
nfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NFA_8390 (truA)
Prokaryotic type
NFA_8390 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AAA_33
NPBW
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAD55684
NIH_Japan:
nfa8390
UniProt:
Q5Z1K7
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All DBs
Position
932027..932800
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AA seq
257 aa
AA seq
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MGWARQPGLRTVQGVLEDALGKVLREPIQLTVAGRTDAGVHAEGQVAHFDTAAEFDGPQL
VHRLARFLPKDVRVKRADVVPPDFDARFSAIRRHYVYRLTTAPYGAEPLAARSVVPCKSA
VDVDAMRRASGLLLGLHDFAAFCRRREGATTVRELQRFDWERQGDLLLAHVSADAFCWSM
VRSLVGAVLAVGEGRRSPEWVAGLLRETQRSSSVTVAPAHGLSLVAVDYPADDELAARNV
QTREMRSAPAVEGCCGE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgggctgggcgcggcagcccggcctgcgcaccgtgcagggcgtgctcgaggacgcgctc
ggcaaggtgctgcgcgagccgatccagctcacggtcgccggacgcaccgacgcgggtgtg
cacgccgaggggcaggtcgcgcacttcgacaccgcggcggagttcgacggtccgcagctg
gtgcaccggctggcccggttcctgcccaaggacgtccgggtcaagcgcgcggacgtggtc
ccaccggatttcgacgccaggttctccgcgatccgccgccactacgtctatcggctgacc
accgcgccctacggggccgaaccgctggcggctcgcagcgtggtgccgtgcaagagcgcg
gtggatgtcgatgcgatgcgccgtgcctcgggattgctgctggggctgcacgatttcgcc
gcgttctgccgtcgccgggagggcgccaccacggtgcgggaactccagcggttcgattgg
gagcggcagggggatctgctgctcgcgcacgtgagtgcggacgcgttctgctggtcgatg
gtgcgcagcctggtcggcgccgtactcgcggtgggggagggcaggcgcagcccggagtgg
gtggccgggctgctgcgcgagacgcagcgctcgagttcggtgacggtggcgcccgcgcac
ggcctcagcctcgtcgcggtggactatccggccgatgacgaactcgccgcgcgcaacgtc
cagaccagggagatgcggtcggcgcccgcggtggaggggtgctgcggggagtga
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