Nocardia farcinica IFM 10152: NFA_9470
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Entry
NFA_9470 CDS
T00207
Symbol
sdhA
Name
(GenBank) putative succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00020
Citrate cycle (TCA cycle)
nfa00190
Oxidative phosphorylation
nfa00650
Butanoate metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01120
Microbial metabolism in diverse environments
nfa01200
Carbon metabolism
Module
nfa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nfa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nfa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NFA_9470 (sdhA)
00650 Butanoate metabolism
NFA_9470 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NFA_9470 (sdhA)
Enzymes [BR:
nfa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NFA_9470 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
DAO
Pyr_redox_2
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BAD55792
NIH_Japan:
nfa9470
UniProt:
Q5Z199
LinkDB
All DBs
Position
complement(1048805..1050604)
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AA seq
599 aa
AA seq
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MSESSERNSGAVAARPVQEHRYDVVIVGAGGAGMRAAIEAGPRVRTAVLTKLYPTRSHTG
AAQGGMCAALANVEEDNWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFN
RTPEGKIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVQFFNEFYVL
DLVLTETDRGPVATGVVAYELATGDLHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMA
IVFRKGLPLEDMEFHQFHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLA
PRDIVARSMVLEVLEGRGAGPNKDYVYIDVTHLGEDVLEEKLPDITEFSRTYLGVDPVKE
LVPVFPTCHYVMGGIPTRIRGEVLRNNDDIVPGLYAAGECACVSVHGANRLGTNSLLDIN
VFGRRAGIAAAEYAERTDFVEMPENPAQMVQDWLALILSDHGNERVADIRTELQRSMDNN
ASVFRTEDTLKQALTDIHALKERYSRITVQDKGKRYNSDLLEAVELGFLLELAEVTVVGA
LNRKESRGGHAREDYPDRDDVNFMRHTMAYKEGTDLLSDIRLDFKPVVQTRYEPMERKY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtccagcgaacgtaacagcggcgccgtcgcagcccgtcctgttcaggaacat
cgctacgacgtcgtcatcgtcggtgccggcggcgcgggtatgcgcgcggccatcgaggcg
ggcccgcgcgtccggacggccgtgctgaccaagctgtacccgacccgtagccacaccggc
gcggcccagggcggcatgtgcgccgcgctggccaacgtggaagaggacaactgggaatgg
cacaccttcgacaccgtcaagggtggtgactacctggtggaccaggacgccgcggagatc
atggccaaggaggccatcgacgcggtgctcgacctggagaagatgggcctgccgttcaac
cgcacgcccgagggcaagatcgaccagcgccgcttcggcggtcacacccgcgatcacggc
aaggcgccggtgcgccgcgcctgctacgcggccgaccgcaccggccacatgatcctgcag
acgctgtaccagaactgcgtcaagcacgacgtgcagttcttcaacgagttctacgtgctc
gacctggtgctcaccgagaccgaccgcggtccggtcgccaccggcgtggtcgcctacgaa
ctggccaccggcgacctgcacgtcttccacgccaagtcgatcgtgttcgccaccggcggc
tcgggccgcatgtacaagaccacctcgaacgcgcacaccctgaccggtgacggcatggcg
atcgtgttccgcaagggcctgccgctcgaggacatggaattccaccagttccatccgacg
ggtctggccgggctgggcatcctcatctccgaggcggtccgcggtgagggcggcatcctg
cgcaacgccgacggcgagcgcttcatggagcgctacgcccccaccatcaaggacctcgcc
ccgcgcgacatcgtcgcccgctcgatggtgctcgaggtgctcgagggccgcggcgccggg
ccgaacaaggactacgtctacatcgacgtgacccacctcggcgaggacgtgctcgaggag
aagctgcccgacatcaccgagttctcccgcacctacctgggcgtggacccggtgaaggag
ctggtgccggtcttcccgacctgccactacgtgatgggcggcatccccacccgcatccgc
ggcgaggtgctgcgcaacaacgacgacatcgtgcccggcctctacgccgcgggtgaatgc
gcctgcgtctcggtgcacggcgccaaccgcctcggcaccaactcgctgctggacatcaac
gtcttcggccgccgggcgggcatcgccgccgccgagtacgccgagcgcaccgacttcgtc
gagatgccggagaacccggcgcagatggtgcaggactggctggcgctgatcctgtccgac
cacggcaacgagcgcgtcgccgacatccgcaccgagctgcagcggtcgatggacaacaac
gcctcggtgttccgcaccgaggacacgctcaagcaggccctcaccgacatccacgcgctc
aaggagcggtactcgcggatcacggtgcaggacaagggcaagcgctacaacagcgacctg
ctcgaggccgtcgagctgggcttcctgctcgagctggccgaggtcaccgtggtgggcgcg
ctcaaccgcaaggagtcgcgcggcggccacgcccgcgaggactacccggaccgcgacgac
gtgaacttcatgcggcacaccatggcctacaaggagggcacggatctgctgtccgacatc
cggctcgacttcaagccggtggtgcagacccgttacgagccgatggagcgtaagtactga
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