Nocardia farcinica IFM 10152: PNF1_100
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Entry
PNF1_100 CDS
T00207
Name
(GenBank) hypothetical protein
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00270
Cysteine and methionine metabolism
nfa01100
Metabolic pathways
Module
nfa_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PNF1_100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
PNF1_100
03032 DNA replication proteins [BR:
nfa03032
]
PNF1_100
03036 Chromosome and associated proteins [BR:
nfa03036
]
PNF1_100
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nfa02048
]
PNF1_100
Enzymes [BR:
nfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PNF1_100
Transcription factors [BR:
nfa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PNF1_100
DNA replication proteins [BR:
nfa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PNF1_100
Chromosome and associated proteins [BR:
nfa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PNF1_100
Prokaryotic defense system [BR:
nfa02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PNF1_100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BAD60535
NIH_Japan:
pnf1100
UniProt:
Q5YMQ6
LinkDB
All DBs
Position
pNF1:complement(8486..10171)
Genome browser
AA seq
561 aa
AA seq
DB search
MLELMDWFCGAGGSTQGASKVPGVCVTRAANHWDKAIETHATNYPEADHFLGDLSTEEAK
AQIVKWPVADIFWASPECPQWSSARGKKRDFHNTLQGDLLDLQRDEEADRSRALMEEVPM
YLRGVIERGGRVRAGVVENVVEVRQWDQWHRWIGEIRALGYGVRVIALNSAHAQPVRTPA
APQSRDRLYVAYWDLKLGRTPDWNKWLRPMAYCAECGWVQALQAFKRPGADMGRYRTQYF
YRCPRYTCRNAVIEPPVLPAAAAIDWTLPGTRIGDRDKPLAPKTMERIRVGMRRYASMVP
MMVPAGGTWRDDATQVTGPMAARTTRENDGLAIPQPFLALLRSDRPRTIGLHEPLATVVA
DGSNHGLVVPPPLMIPMEGRDGKEAQLASMPLRTQTTRNETAVAFLPFVAELRGGSSDAR
PVTEALATVTASGNHHGLVTPPTPPTGMSPELWNSLLLPYYGNSTARPVSDPMGTLSTRD
RFALVDMITERDIENTRFRMLEPHEIQDAMAFRKDYIVLGNKRQQVRQLGNAVTPPAAEI
LISALVEAITGEELDRYAPTA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaactgatggattggttctgcggcgctggcggctccacccagggcgcatcgaag
gtgcccggtgtgtgcgtcacccgcgcggcgaaccactgggacaaggccatcgagacccat
gccaccaactaccccgaggccgatcatttcctcggcgatttgagcaccgaagaggccaag
gcgcagatcgtgaaatggcctgtggccgacatcttctgggcttcgccggagtgcccgcag
tggtcctcggcgcgcggcaagaagcgcgacttccacaacaccctccagggcgatctgctc
gacctccagcgcgacgaggaagccgaccgcagccgggcactgatggaagaggtcccgatg
tacctgcgcggcgtgatcgagcgcggcggccgcgttcgcgccggggtcgtggagaacgtc
gtcgaggtccgccagtgggatcagtggcaccgctggatcggtgagatccgcgccctgggc
tacggggtcagggtcatcgccctgaactccgctcatgcgcagccggtccgcaccccggcg
gcaccgcagagccgggaccggctctacgtcgcgtactgggatctcaagctcggccgcacg
cccgactggaacaagtggttgcgtccgatggcctactgcgccgaatgcgggtgggtacag
gcgctccaggcattcaaacgccctggtgccgacatgggccgctaccgcacccagtacttc
taccgctgccctcgctacacctgccgcaacgccgtgattgagccgcccgtgctcccggcg
gccgccgcgatcgactggaccctgccgggcacccgcatcggcgaccgggacaagcccctg
gcccccaagaccatggaacgcattcgcgtcggcatgcgccgctacgcctccatggtgccg
atgatggttcccgccgggggcacctggcgcgacgacgccacccaggtcaccgggcccatg
gccgcccgtaccacccgcgagaacgacggcctggcgatcccgcagccgtttctggcgctg
ctccgctcggaccgcccccgcacgatcggcctgcacgaacctctcgccacggtcgttgcc
gacggctccaaccacggcctggtcgtgccgccgccgctgatgatcccgatggagggccgc
gacggcaaggaggctcagctggcctcgatgccgctgcgcacccagaccacccgcaacgag
acggcggtggcgttcttgcccttcgtcgccgagctgcgcggcggctcctcggatgcgcgg
ccggtgaccgaggctctggccaccgtcaccgccagcggcaaccaccacggcctggtcacc
ccgcccaccccgcccaccgggatgtcgccggagctgtggaactcgctgctgctgccctac
tacggcaacagcaccgcccgcccggtctccgacccgatggggacgctgtccacccgcgac
cgcttcgccctggtcgacatgatcaccgagcgcgacatcgagaacacccgattccggatg
ttggagccgcacgagatccaggacgcgatggcgttccgcaaggactacatcgtgctcggc
aacaagcgccagcaggtgcgccagctcggcaacgccgtcaccccgcccgccgccgagatc
ctgatctccgcgctggtggaggccatcaccggcgaagagctcgaccgctacgccccgacg
gcgtga
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