Nocardia farcinica IFM 10152: PNF2_750
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Entry
PNF2_750 CDS
T00207
Name
(GenBank) putative DNA methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00270
Cysteine and methionine metabolism
nfa01100
Metabolic pathways
Module
nfa_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PNF2_750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
PNF2_750
03032 DNA replication proteins [BR:
nfa03032
]
PNF2_750
03036 Chromosome and associated proteins [BR:
nfa03036
]
PNF2_750
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nfa02048
]
PNF2_750
Enzymes [BR:
nfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PNF2_750
Transcription factors [BR:
nfa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PNF2_750
DNA replication proteins [BR:
nfa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PNF2_750
Chromosome and associated proteins [BR:
nfa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PNF2_750
Prokaryotic defense system [BR:
nfa02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PNF2_750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DUF6587
Motif
Other DBs
NCBI-ProteinID:
BAD60763
NIH_Japan:
pnf2750
UniProt:
Q5YM28
LinkDB
All DBs
Position
pNF2:complement(71302..72927)
Genome browser
AA seq
541 aa
AA seq
DB search
MMGVRMSLRSTVYFAGWGGDSLGWEEVPGIELRLAANHNPVCVEVHTLNFPDAEHLPPGD
VEAIDLATLPYTELFWASPACPAWTDAKGRKRYFDKSNQYTLLSDDELGTVIEDPAEARS
RGLVEQIPRYLRAMAGRGTPVLAGVMENVIQCRRWDQWDRWLRAIESIGPGYETRVIALN
SMHAVPRRCLPAPQSRDRLYVAYWLKSLGRRPDWDKWLRPKAWCPTCDRVVDAVQSWKQP
GIDMGRYGARHGQYVYRCPAKSCRFQIVEPFTVPAAAAIDWSLDPGEKIGERARPLAAAT
MERIRIGLAKFAGESFLTPAGGTWRADPTALSAPMPARTTRESDGLVVPPLIVQTSKRAD
LTARSTGQPLPTQTTRRELAVAIPPFITSLRGGGSRKTARHVGEPLGTFSARGFHHGLVQ
PPGSTAVVEQLAGTREQLLVPYYRTGLARPLTEPMGTLTTRDRHGLLGIDPDRILAECTF
RMLEPDEIRAGMAFPPTYIPIGDKRTQAAGYGNAVTPPVPEVIGCALVEAITGEPIERTA
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatgggggttcggatgtctctgagatccacggtctacttcgccggttggggtggcgat
tcgctgggctgggaggaggttcccggcatcgagttgcggctggcggccaaccacaacccg
gtgtgtgtggaggtccacacactgaacttcccggacgccgagcatcttccgcccggcgac
gtcgaagccatcgacctggcgaccttgccctataccgagttgttctgggcgtcgccggcg
tgcccggcctggaccgacgccaagggccgcaaacggtacttcgacaagtcgaatcagtac
acgctgctcagcgacgacgagctggggacggtgatcgaggatccggctgaggcccgctcg
cgcgggctggtcgagcagatcccgcgctacctgcgggcgatggccgggcgcggcaccccg
gtgctggccggggtgatggagaacgtcatccagtgccgtcgctgggatcagtgggaccgc
tggctgcgcgcgatcgagtcgatcggccccggctacgagacccgggtgatcgcgctcaac
agcatgcacgcggtgccgcgccggtgcctgcccgcaccgcagagccgcgaccggctctat
gtcgcctactggctcaaatccctggggcgacgcccggactgggacaaatggttgcgcccg
aaagcctggtgcccgacttgcgatcgggtggtggacgcggtgcagtcctggaagcagccc
ggcatcgacatgggccgctacggcgcccgccacggccagtacgtctaccgctgcccggcc
aagtcctgccgcttccagatcgtggagccgttcacggtcccggccgccgccgccatcgac
tggagcctggatccgggagagaagatcggcgagcgggcccgcccgctggccgcggccacg
atggagcggatccggatcgggctggcgaaattcgctggtgagtcgttcctgaccccggcc
gggggcacctggcgcgccgaccccaccgcgctgtcggcgccgatgcccgcccgcacgacc
cgcgagagcgacggcctggtggtgccgccgctgatcgtgcagaccagcaagcgcgccgac
ctcaccgcccgcagcaccggccagccgctgccgacacagaccacccgccgcgaactcgcc
gtggccatcccgccgttcatcaccagcctgcgcggcggcggcagcaggaagaccgcccgc
cacgtcggagaaccgctgggcaccttctccgccaggggctttcaccacggcctggtgcag
ccgcccggatcgaccgcggtcgtcgagcagctggcgggcacgcgtgagcagctgctcgtg
ccctactaccgcaccggcctcgcccgcccgctcaccgagccgatgggcaccctgaccacc
cgcgaccggcacggcctgctcggcatcgaccccgacagaatcctggccgagtgcacgttc
cggatgctcgaacccgacgagatccgggccgggatggcattcccgcccacctacatcccc
atcggcgacaagcgcacccaggcggccggctacggcaacgcggtcaccccaccggtgccc
gaggtcatcggctgcgccctcgtcgaagccatcaccggagaaccgatcgaaaggaccgcc
gcatga
DBGET
integrated database retrieval system
