Neodiprion fabricii: 124174496
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Entry
124174496 CDS
T08986
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
nfb
Neodiprion fabricii
Pathway
nfb04140
Autophagy - animal
nfb04142
Lysosome biogenesis
nfb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124174496
04140 Autophagy - animal
124174496
04148 Efferocytosis
124174496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfb04131
]
124174496
Membrane trafficking [BR:
nfb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124174496
Hops complex
124174496
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3H2C3
zf-RING-like
zf-C3HC4
Beta-prop_WDR36-Utp21_1st
zf-RING_5
PSII_Pbs27
zf_RING_Vps8_fungal
TPR_11
Motif
Other DBs
NCBI-GeneID:
124174496
NCBI-ProteinID:
XP_046409664
LinkDB
All DBs
Position
1:complement(31045899..31051809)
Genome browser
AA seq
1095 aa
AA seq
DB search
MMAFLEWRRFNFFDLKKEVDSGKISEALGEAQVTAATSGNGDLVFGDNTGNVHLVNRKYV
ITTFRAYEITLTLAQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKLDKHGNPTCVRISRAV
PGYRAVPASALCVHSGLTLMAVGFGDGSIMLYRGDLTRERKNKIRILKDSNTPVTGLAIR
STGKQTHMFVATTTSVFLYNITVKDKEYKTSLDNMGCSRKCSVLADSTQGSHFMIGRNDA
VYCYTPDGRGPCYAVDGQKIMLEWFRSYLVIIAKEAANVPRTTTICAKPNTIEPIPPGAD
KHTITVLDIQNKVIVFSAPMLSVQAVLSEWGGFFILSGNSKLYHLDEKDLQSKLTLLFKK
NLYDVSIRIAKSQQYDAEGLVDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKF
LDSQHIDNLTTYLQALHKQGQATGDHTTLLLNCYTKLNHTEKLKEFIMTKDREVDFDVEI
AIKVCRQASSEDALLLATKHGKHEWFLRIQIEDKAEYKGALEYIATLDFEEAESNMKKYG
SVLIEHVPNEATQFLKRLCTNYRPANKPLVDQATLDGSVEQSIEKANPEEFIHLFLGNSE
RLVEFLEHLVKCESKWSTLVYNTLVEHYLHVWSALGSEVAKLQYEQKVVRLLQSSEASYD
KDQILILCQQHNFRRGILFLYEERKLYQEILQYHLREGDNEQILATCKRFGHQDPNLWVQ
ALWSVARNKNASSKLLADILTYIAKEKLLSPLMVVDALSTSMSCTLGDVRNYLNNVLRTE
NEQTQADTDLTKKYQADTQKLREQIESIKNNTIIFQGSRCSACHDQLELPSVHFMCQHSY
HQHCFQSFSENENECPACLPNNKKLLDIIKAQEQSRDLHETFHSLLDRAEDPFSLVADYF
GRGVFKKLTVITDADKPQALPSSKFQEPKPKFQEPKPNYYAYGAGAEAKLRLGEGRNTNL
VTLEPRYVGSDTPSNVVIPIPEGRLRVLAKPDIYSSSFDTSLSGPTSGTSTPRSSRKGSP
ILIREARILNISSPKMSPAQKTFIPPKTPIVPLNPFTGDGYDESKNPFAEDNNTAEDDPF
QEDDDYDKNLNPFAS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttcctggagtggaggcggttcaacttctttgatttgaagaaggaagtggac
agtggcaaaatatctgaagctcttggggaagctcaagtcacagcagcaaccagtggaaat
ggagaccttgtctttggtgataacacaggtaacgtgcacttggtgaacagaaaatatgtg
atcacaacatttcgtgcctatgaaataacgttgaccttagcccaacaagtacaacattct
accttcttatttacaattggtgaagatgagcctggttgtaacccgacaataaaagtttgg
aatctagccaagctggataaacacggtaatccaacttgtgttagaatcagcagagccgtt
cctgggtaccgtgcagttccagctagtgcattatgtgttcatagcgggcttactttgatg
gctgttggtttcggcgatggatccattatgctctacagaggtgatctgacacgggaaagg
aaaaataaaatacgaatactgaaggacagtaatacacctgtaactggacttgcaatacga
tcgacaggcaagcaaactcatatgtttgttgcaacaaccactagtgtattcctgtataat
atcactgtcaaggataaagagtataaaactagtttagataatatggggtgctcaaggaag
tgcagcgttttggctgactcaacccaaggcagtcacttcatgatcgggcgcaatgatgct
gtgtactgttatacaccagatggaagaggtccatgttatgcagtggatggacaaaaaatc
atgctggaatggtttcgaagttatctagtgataatagccaaggaggctgccaatgttccc
agaacaacaactatttgtgcaaaacctaatactatagaacctatacctccaggtgcagat
aagcacacgatcacggttcttgatattcagaacaaagttattgtattttctgcaccaatg
ttgtcagtccaagctgtcttatcagagtggggtggcttcttcattttgagcggcaatagt
aagctgtatcacttagatgaaaaggatttacaatcaaagctgacattattattcaaaaaa
aatctttacgatgtttcaatacgaatagcaaaaagtcaacaatatgatgcggagggactt
gtagatatattccgccagtatggagatcatctgtattcgaaaggtgatcataacggggcc
atagaacaatatataaaaacgatcggaaagctcgaaccgtcttatgtgatacgaaaattc
ttggattcgcaacacattgacaatttaacgacgtaccttcaagcactgcataaacaaggt
caagctactggggaccacactactttattgttaaactgttatacaaaattgaaccatact
gagaaattaaaagaatttatcatgaccaaggaccgcgaagtggatttcgatgtcgaaata
gccataaaagtgtgtcgccaggcatcatcagaagatgcattactcttggctacaaaacat
ggcaaacacgaatggtttttgcgaattcaaatagaagataaagctgaatataaaggggct
ctggaatacattgcaactttagatttcgaagaggctgagtcaaatatgaaaaaatacgga
agcgtattaattgaacatgtaccaaatgaggcgacacaatttttaaaaagattgtgtact
aattatagacctgcaaataaacctcttgttgaccaggccacgttggatggatctgtcgaa
cagagcatcgaaaaagctaatccagaagaattcatacatttgttccttggcaattctgaa
cgtctggttgaatttttagagcatctagtaaaatgtgaaagcaaatggagcacgttagtg
tataataccttagtagaacattatctacacgtttggtcagccttaggtagtgaggtagca
aaactccagtatgaacaaaaagttgtcagattgttacaaagttcggaagctagttatgat
aaagatcagatattaatactttgccaacagcacaactttcgacgaggtatactctttctg
tatgaagaaagaaaattgtaccaagagattctgcagtaccatttacgtgaaggcgataat
gaacaaattttggcaacctgtaaacgatttggccatcaagatcctaatttgtgggttcag
gctttgtggagtgtagctaggaacaaaaacgcatcatcgaaacttttagctgacattcta
acatatattgcaaaagaaaaacttttgtcaccattgatggtggtggatgcgttatcaaca
tcaatgtcctgtacactgggtgatgtacgaaattatttgaataatgtactgcgcactgaa
aatgaacagacgcaggccgacacagacctaacgaaaaaatatcaagcagatacacagaaa
ttaagagagcaaatagaatctatcaaaaataacacaatcatttttcaagggtcacgctgc
agtgcgtgtcatgaccagctagaacttccttcggttcactttatgtgtcaacattcctac
caccaacactgctttcaaagcttttctgaaaacgaaaatgaatgtccagcttgcctcccg
aacaataagaagttattagatatcatcaaagcgcaagaacaatcaagagaccttcatgaa
acatttcatagtctattggatcgagctgaagatccattttctcttgttgctgattatttt
ggtcggggcgtatttaaaaaattaacagtcatcactgacgctgataaaccacaggcatta
ccatcatcaaagtttcaagaaccaaagcctaagtttcaggagcctaaaccaaactattat
gcatatggtgcaggagctgaagcaaagctcagactgggagaaggaagaaatacaaatctt
gttacgttagaaccaagatatgtcggcagtgatacaccatcaaacgttgtgataccaata
cctgaaggaagattaagagttcttgctaaacctgacatctactcgtcatcttttgacaca
agtttgtcaggaccaactagtggaacgtcaacgcctcgatcttcccgaaaaggttcaccg
atcctaattagagaagcgcggattctaaatatctcatcccccaaaatgtcaccagctcaa
aaaacctttattccaccgaaaacgcccattgttccattgaatccttttacaggagatggt
tatgacgaatcaaaaaatccttttgctgaagataataatacagcagaagacgatccattt
caagaagatgatgattatgataaaaacctcaatccatttgcaagctag
DBGET
integrated database retrieval system
