Neodiprion fabricii: 124174576
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Entry
124174576 CDS
T08986
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
nfb
Neodiprion fabricii
Pathway
nfb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124174576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124174576
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124174576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Zfx_Zfy_act
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
124174576
NCBI-ProteinID:
XP_046409743
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All DBs
Position
2:2373492..2378814
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AA seq
691 aa
AA seq
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MSRHRNVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSVSILAEQFLFDRNKQHNISSYITE
DDIVEEDETQEETPLPSSYKRPELSVLDATKLESCIEAIKNVVGDSIPESTLTENILKHN
LNSEAALDAILATTSSNNASEKPAINQNNEDLLQGKKLAAKPAVPVLLSSPAVKVIPSAT
RSVIKGFDISGTDGDFLNTTVESPRSQSPFSGQTSPDIRRKDIKTVSSKSNTPRCQSPAV
EQDNKSKLNSKKLDAISLFKNLRGDIKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVSSKL
LHKFQTESKKIGKQSFAYAWVLDETGEERERGVTMDVGHSKFETATKTITLLDAPGHKDF
IPNMIMGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRPLGVSQLAVVINKLDTV
DWSKDRYDEIVEKMRVFLKQAGFRDAVPFVPCSGLSGENLVSKSKEEGLIKWYNGPTLTE
VIDQFKCPKRPVDQPFRFSVNDIYKGTGSGFCVSGHVETGMIATSDKVLVLPHNEVASVR
GLQIDDMPVTNGFAGDHLVFTLTGIDQQIIAVGDLLCDPQHPVPVTTRFEAHIVIFAVAM
PITRGLPVVMHHQSLVEPVVLKKLIAQLHKSSGEVIKKKPRCLPKNSSAIVEIETQRPIC
MELYRDVKQLGRIMLRVGGSTIAAGLVTKIY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaacgtccgttctatgaattactctgatgagtatgatggatatgat
gatgtttatgggcattccgttgaagatgattattgcgtttctccaagtgtttcaatttta
gcggaacaattcttatttgaccgaaacaagcagcataacatttcttcatacattacggaa
gatgacatagtggaggaagatgaaactcaagaggagaccccattgccctcgagctataaa
aggccggaactctcagttcttgatgcaacaaaactagagtcctgcatcgaagctataaaa
aatgttgtcggtgactctatccctgagtccacactcacggaaaatattctcaagcataac
cttaactcagaagctgcacttgatgctatacttgctactacgtcgtcaaacaatgcatct
gaaaagccagccatcaatcaaaataatgaggatcttcttcaaggtaaaaaactagccgct
aaaccagcagtacctgtgctactatcctcccctgctgtaaaagtaattccatcagcgaca
cggtcggtcatcaaaggcttcgacattagtggaacagacggagatttccttaacacaaca
gttgagagtccgagatctcaaagtccattctccgggcaaacctcacctgatattcgaaga
aaagacattaaaacagtttcatcaaaatcaaacaccccaagatgtcagtccccagcagta
gaacaagataacaaatcgaaattaaatagtaaaaaattggatgcgatcagcctgttcaag
aatcttcgtggagacataaaggagcagttgcacttggtagtcgtcggccatgttgatgcc
ggaaagagcacattactgggtagactgctttgcgatctaggacaggtgtcttcaaaatta
ttacacaaatttcaaactgaaagcaagaagattggcaagcaatcgtttgcatatgcatgg
gtgctcgatgaaactggcgaagaaagggaacgtggtgtcacaatggacgttggccactcc
aaatttgaaaccgctactaaaactattacacttttggatgccccaggtcacaaagacttt
attccaaacatgattatgggtgcgacccaagccgacgtggctcttctagttgttgatgct
acgagaggagaatttgaaactggttttgacagcggtggacaaacaagagaacacgctttg
cttttacgccctctcggtgtctctcagctggcagtagtaataaacaaattggataccgtt
gactggtccaaggatagatacgatgaaatagttgaaaagatgagagttttccttaagcag
gctggttttcgagacgctgtaccatttgtaccatgtagcggtttgtccggggaaaattta
gtctccaaatccaaggaggaaggactgattaaatggtacaacggacccaccttgaccgaa
gttatcgatcagttcaaatgtccaaaacgacctgttgaccaacccttcaggttttcggtg
aatgacatttacaagggaactggctcaggattttgtgtatcgggacatgttgagactggg
atgattgctacgagtgataaggtgttagtactacctcacaacgaagtcgcttctgtccga
ggcttacagatagacgatatgcctgtaacaaatgggtttgccggcgaccatcttgtcttc
acattgacagggatagatcagcagattatagctgttggcgacttgttgtgtgatccccag
cacccggtcccagttacgactcgattcgaagcgcacatagtaatatttgctgtagcgatg
ccgattactcgtggccttccggtagtaatgcatcaccaatcgctcgtggagccagtggtg
ttaaagaaactcattgctcagctccacaaaagttctggggaagtgataaaaaaaaaacct
cgatgtctgcccaaaaattctagcgctatcgttgaaatagaaactcagagacctatttgc
atggaattatacagagacgttaagcaacttggcagaattatgctgcgtgtgggtggttct
actatagctgctggtttggttactaagatatactaa
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