Neodiprion fabricii: 124174627
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Entry
124174627 CDS
T08986
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124174627
09123 Folding, sorting and degradation
03018 RNA degradation
124174627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124174627
03041 Spliceosome [BR:
nfb03041
]
124174627
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124174627
mRNA degradation factors
5'-3' decay
Lsm complex
124174627
Spliceosome [BR:
nfb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124174627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
BPL_C
Hfq
Motif
Other DBs
NCBI-GeneID:
124174627
NCBI-ProteinID:
XP_046409882
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Position
2:5355422..5357089
Genome browser
AA seq
91 aa
AA seq
DB search
MTSSVTTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLDDVTESEAT
PEGRRVTKLDQILLNGNNITMLVPGGDMPET
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactagctctgtaactacgaatccatccacgcttttgccgctagaattggtggacaag
tgcatcggctcccgcattcacattatcatgaaaaatgataaagaaattgtgggtacatta
caaggatttgatgactttgtgaatatgttattggatgatgtgactgaaagcgaagcaacg
cccgagggacgcagagttacaaaattggatcagatcctcctcaatggaaataacattacg
atgttagtacctggaggtgatatgccagaaacataa
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