Neodiprion fabricii: 124174659
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Entry
124174659 CDS
T08986
Name
(RefSeq) exodeoxyribonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124174659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124174659
Enzymes [BR:
nfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124174659
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124174659
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GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
124174659
NCBI-ProteinID:
XP_046409935
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Position
1:25678393..25681432
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AA seq
407 aa
AA seq
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MRSVARLAFGLIGLGRIATQREGQNYAVVYSTVTLNRQFLRLSSQKLFLSFINLRLFKHV
TANMPPKRRAPRKVSRKAEAGTSQEDEIQTKTAAKSASKKTKRNVDEEEASNHEPAPKKT
KLEQKKAPMNKTESNLNNIDFDCPKLNANGDKFNVKICSWNVSGVRACLKKNGFEYLLKE
NADIIALQETKCDKDKLPDEIKLPGYHEYFIDSKKSGYCGVALYSKKEPLDIIYGLNIPK
HDDEGRMITAEYENFFVVCVYVPNAGKNLVTLPKRLQWNEDFKKFIQKLDAKKPVIVCGD
MNVAHNEIDLKNPTTNTKNAGFTKEERQGMTDFLDAGYVDTFRQLYPDKTDAYTFWAYFN
NSRSKNIGWRIDYFLVSKTIKDNVCDSVIRDQIFGSDHCPIILYANL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcgttgcacgcttggcatttggattaataggattgggaagaatcgcgacgcag
cgtgaggggcaaaattacgcggttgtttactccaccgttacgttgaatcgtcaattcctt
agactttcttcacagaaattatttctttcttttattaatttaaggttattcaagcacgtg
acagcgaatatgccgccaaaacgcagagcaccacgaaaggtatcgcgtaaagctgaagca
ggaacttcgcaggaggacgaaatacaaactaaaactgctgcaaagtcagcaagtaaaaaa
acaaagcggaatgtagatgaagaggaggcttcaaatcacgaaccagctccaaagaaaact
aaattggagcaaaagaaagccccgatgaataaaactgagtcaaatttaaataatattgac
tttgattgcccaaagttgaatgcaaatggtgacaagttcaacgttaaaatatgcagctgg
aatgtatctggagttagagcatgtcttaaaaaaaatgggtttgaatatcttttgaaggaa
aatgctgatattattgcacttcaagagacaaaatgtgacaaagacaaactacctgatgaa
ataaaacttccagggtatcacgaatactttatagacagcaagaaatctggatactgcgga
gttgccttatacagcaagaaagaaccgttggatattatatatggattaaacattccaaaa
catgatgatgagggtagaatgataacagcagaatatgaaaatttttttgtcgtttgtgtc
tatgttcctaatgccggcaaaaacctggttacactgcctaaaagactgcagtggaatgaa
gatttcaaaaaatttattcaaaagctagacgcaaagaaaccagttattgtgtgcggagac
atgaatgttgctcataacgaaatagacttgaaaaacccaacaacaaacacgaaaaatgca
ggtttcaccaaagaagaacgacaaggtatgacggatttcttagatgctggttacgttgat
acatttagacaactatatcctgacaaaaccgacgcatatacattttgggcatacttcaat
aattcacgcagcaagaatattggatggaggattgattactttctggtttctaagacaata
aaagataacgtttgtgacagtgttatcagagatcagatatttggcagtgatcactgtccg
ataatactttacgcgaacttgtaa
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