Neodiprion fabricii: 124174935
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Entry
124174935 CDS
T08986
Name
(RefSeq) exosome complex component MTR3-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124174935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124174935
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124174935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124174935
NCBI-ProteinID:
XP_046410550
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Position
2:complement(14212661..14215041)
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AA seq
350 aa
AA seq
DB search
MRDSSSLLFFAANCSLIAGKLIPLLGSEFGVVRWSSVSFPLTSCFSERPCGTTCKTQKFL
YVRTSIGVRVTFVKRINGPEVSVPYSVYTDVNKSKSSKPKKSLHKRVDGREHKDLRKIFV
KTGVISQAKGSAYIEVGITKVVCSVFDPREIPNKNEYSLQGELFCEFKYAPFACAKRRIH
QQDAEEKEFSLVMQRSLEPAVCRQEFPNFQVDVYALVLDNGGSSLAAAIMCASLALADAS
VPMFGLVTAVSAGFYKDTMFLDLTVEEEVLCNSAPAKPNPSNNHGLIMQAALPQHDQISE
FFLVGSINIDCIKQAIETLTVANKNICPVVQQCLVKTVLRALKRKEQEKN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactcgtcatctctgttatttttcgcagcgaactgctcacttatcgctggaaaa
ttgatcccacttttgggatcggagttcggtgtggttcggtggagttcggtctccttccct
cttacttcgtgcttttcggaaagaccatgcggtaccacttgtaagacacaaaaatttcta
tatgtaagaacatcaattggtgtgagggttacctttgtaaaacgtataaatggtccagag
gtttccgtaccgtatagcgtctacactgacgttaataaatcaaaatcaagtaaaccaaaa
aaatcactgcataaaagagttgatggtcgagagcataaggatctcagaaaaatttttgtc
aaaactggtgttatcagccaagcaaaaggatcagcctacatagaggttggaattacaaaa
gtggtatgttcagtatttgacccgagggaaattccaaacaagaatgaatacagtttacaa
ggtgaactcttttgcgagtttaaatacgccccatttgcctgtgcaaagagacgaatacac
caacaagatgcggaggaaaaggaattcagtctcgttatgcaacgatcactagaaccagct
gtttgcaggcaagagttcccaaattttcaagtcgacgtgtatgctctggtcctcgacaac
ggtggctcctctttagcagcagccataatgtgtgccagtcttgcattagcagatgcaagt
gtccccatgtttggtctggttactgcagtttccgcagggttctataaagatacaatgttt
ttggatctgacagtggaggaagaggtactttgtaattctgcaccagcaaagccaaaccca
tccaataaccatggactgatcatgcaagctgctttaccgcaacatgaccagatttcagag
ttttttctcgttggaagcattaacatagattgcataaaacaagctatcgaaaccctcact
gtagctaataagaatatatgtccagttgttcagcaatgtttagtcaaaactgtcctcaga
gctttaaagcgaaaggaacaggaaaaaaattaa
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