Neodiprion fabricii: 124175027
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Entry
124175027 CDS
T08986
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124175027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124175027
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124175027
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124175027
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Gene cluster
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
124175027
NCBI-ProteinID:
XP_046410784
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Position
2:complement(23225945..23234617)
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AA seq
298 aa
AA seq
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MNDEDMIRVRLAVHRTNTNLSNGDHGMPRYYTPGEEVCSQPDFMRGHGTYMDDNDTLRAS
VAGVLEKVNKLISVKPLKARYQGEIGDVIVGRITELQQKRWKVDTNSKLDSALLLSSVNL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQNVFADGSLSLHTRVLKYGKLSQGILLKVP
PSLIKRKKVHFHNLLIGANLILGNNGYVWIGASIHNTDRTEGGFAQDLSRIPQQDREMCA
RLRNCILALARSNILLTDTSVIYAYDESTKYSANELLQPEAALDVALLTQQRLGERID
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaagacatgatccgcgtgcgactggcagttcatcgcacaaatacgaattta
tctaacggtgaccatgggatgcccagatattatacacccggtgaagaggtgtgtagtcag
cctgacttcatgagaggtcatgggacatacatggatgacaatgacacgctgcgcgcatcc
gtcgctggtgtgctagaaaaagtgaataaactgatatctgtgaaacctttgaaggcacga
taccaaggtgaaattggagatgtaattgtcggccgaattacagagcttcagcaaaaacgc
tggaaggttgatactaactcaaaattggattcggccctacttttatccagtgtcaatctt
cctggtggagaattgaggcggagatcagcagaggatgaacaaacgatgcgacgttacttg
caggagggtgatttgatatgtgcagaggtgcaaaatgtcttcgctgatggttcgctgtca
ttgcacacaagggttttgaagtatggaaaactttcacaggggattttgttgaaagtgcca
ccttcgctgattaaacgaaagaaggttcatttccacaatttgttaattggcgccaatttg
atactggggaataatggttatgtgtggataggtgctagcattcacaacaccgatcggaca
gaaggtggatttgctcaagatttgtcccgtataccgcagcaggatcgagaaatgtgcgcg
cgattgcgaaattgcattttggctttggctcgatccaacattttactcactgatacatca
gtaatttacgcttatgatgaatctaccaaatactctgcgaatgagttgctacaacctgaa
gctgcactcgacgtcgcacttctcacacagcagaggcttggtgagagaattgattga
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