Neodiprion fabricii: 124175108
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Entry
124175108 CDS
T08986
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
nfb
Neodiprion fabricii
Pathway
nfb03013
Nucleocytoplasmic transport
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124175108
09122 Translation
03013 Nucleocytoplasmic transport
124175108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124175108
03041 Spliceosome [BR:
nfb03041
]
124175108
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124175108
Spliceosome [BR:
nfb03041
]
Complex C
Other components
EJC/TREX
124175108
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124175108
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Tricorn_2nd
Beta-prop_NOL10_N
eIF2A
Beta-prop_HPS5
RMC1_N
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
NBCH_WD40
DSE1_N
Beta-prop_ELP1_1st
TRM82_WD
Beta-prop_EIPR1
PAC11
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Peptidase_S9_N
PD40
PROPPIN
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
124175108
NCBI-ProteinID:
XP_046410968
LinkDB
All DBs
Position
1:13806804..13811780
Genome browser
AA seq
415 aa
AA seq
DB search
MSARACYVESIEQKPPTLPGPHGHTCPPKAIRKLIHKNLPRDPRGNCPYNLQSTPQSTFT
GFPKNFKELFWRHSKNCSPDRLAMLCGQLCQINMAASNSRVDELTSYFKTHNKIKEQQSH
SAKVHSVGWSCDGRLLASGSFDKCVCIFSLGTDRLKQETTFRGHGGSVDQLCWHSFHPEL
LSTASGDKTMRIWDTRSQKCTANIATRGENINISWSPDGNTIAVGNKEDLVTFIDARVMK
IRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVHILSYPDLELLHVIKAHPGTCICIEFDP
TGRYFATGSADALVSLWDADELCCLRTFSRLEWPVRTISFSHDGQLLAAASEDLVIDIGE
VETGEKVADIPVEAATFTVAWHPKQYLLAYACDDKDTYDRKRDAGSLKVFGFSSE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacgagcctgttacgtagagtcgatagagcagaaacctcctacgctcccgggc
ccacatgggcacacttgcccgccgaaagccatccgaaaactgatacacaaaaatttaccc
agggaccccaggggtaactgtccttataatctacagtcaacgcctcagtcaacgtttact
gggttcccgaagaattttaaagaattgttttggcgccattcaaagaattgttcgcctgat
aggttggcaatgctgtgcggtcagctgtgtcaaataaacatggcagcgtcgaatagccgg
gtcgacgagttgacaagttattttaaaacacataacaaaatcaaagagcaacaaagccac
tcagcaaaggtacacagcgttggctggagctgtgacgggagactactggcgtccggctcg
ttcgacaagtgtgtttgtattttttctcttggaaccgatcgtttgaaacaagagacaacg
ttccgcggacatggaggaagcgtggatcaattatgttggcactcatttcaccctgagcta
ctatcaactgcaagtggagataaaaccatgcgtatttgggacacaagatctcaaaaatgc
acagcaaatattgcgacacggggtgaaaacatcaatatatcttggtcgcctgatggtaac
acaatagcagttggcaacaaggaggatttagtgacattcattgatgcaagagtaatgaaa
attcgtgccgaggaacaattcaactttgaagtcaatgaaatatcttggaacaaagattcg
gacacattttatcttacaaatggtcagggatgtgttcatattctaagctatccggaccta
gaactactgcatgtaatcaaagctcatccagggacatgcatttgcattgaatttgaccct
actggtcgttacttcgcaacagggtcagctgatgctttagtgtctctgtgggatgctgat
gaattatgttgcctaaggacattttctcgattggaatggcctgttagaaccatttcattc
tctcatgatgggcaactcctagcagctgcttctgaagacttggtcatagacattggagag
gtagaaacgggagaaaaagttgccgatataccggttgaagctgcaacatttacggtggcg
tggcatccaaaacaatatttattggcatatgcgtgtgacgataaagacacttacgatcga
aagagggatgctggaagcttgaaagtttttgggttttcaagcgaataa
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