Neodiprion fabricii: 124175173
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Entry
124175173 CDS
T08986
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03440
Homologous recombination
nfb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124175173
03450 Non-homologous end-joining
124175173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfb03032
]
124175173
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124175173
DNA replication proteins [BR:
nfb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
124175173
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
124175173
BRCA1-C complex
124175173
NHEJ (non-homologous end-joining)
MRX complex
124175173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_29
AAA_16
AAA_22
AAA
AAA_13
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
124175173
NCBI-ProteinID:
XP_046411110
LinkDB
All DBs
Position
2:complement(11311395..11323846)
Genome browser
AA seq
1369 aa
AA seq
DB search
MSRVRRLGISGIRNFGPGDDERGLQTIRFSHPLTMIFGPNGTGKTTIIEALKYASTGDFP
PGCGANNQNSFVHDALLTDECSVKGVVIAEMCDTKGNIVTVSRRLLSVQKKFKKGCKVLD
TTLSTQNIKTGEKVSISHRCADVDLEMGLALGVSKPILNHVIFCHQEDSTWPLEDGKKLK
ERFDQIFDSDKYNKAVERIRKFNNKIKNDLRVTKAQRESLEILLEESNQKKKSLEKYETR
LVKSIQKVSEVVEKMKPLNEKMNELRDSEAHYIKLHTEKETKKTEYGLIKQQIMELKESI
QVLHDGTAEELQKEIAAFDNTRVEMESEMEMLKNKSRDMNKEESKLKVTISNKQLSIGKL
KEQAQALEKNISLRNCKLSQMRTEWGLDEVGEEVTETEAAVGLDQLKDKLTEMERNIKDI
ALKHQAVEKTLQEELDALRDQKSKLESGMVLFKRQIAEKRTETRRIRAQIEEVNMLASQL
ELVDSKLQEANTKLDTMAASFDVDAVKKNIEDEIKERDQMELSLDKLDEEVKLLQQQSSL
HAELDLLRSSLAVKEKDIQKLKNKHQANLKMLLKTEVLPESNLKHTLSGIHDSFSEQIKQ
LNHQLQKEQRVLTTLETTKKHHEHEIKEKNSELEDIQDKIATMCHGIDYEEVLLHAKKTV
QDLQDSKGMYTYKSIAYKDYIKKTDSCCPLCHRNFDSQQEIEEFKSELNEEVNKYPNQLK
TCEEKLKVQQERYDSLLQLKPLVDKVKQIEETTLKKLRNDLIQVKQKLSESHARVEKLQL
QIAEPESKLAQCKDIVCDVAQWDQYSAEVVKLNQSIARVKARLSDKVGERSMQEAQTEQE
LLRKSLSTIRKRIEKLQSSLSTHNDKLQQARESRNRLVEEQLRMKSEVQKLQQLQDKLKD
LHAEEVSLQENVQQLQVQLGPVNQNLAAKNDSLQKIKREHRESLDNDRSVVSQKSRSLHD
LNTIQSQIDNSIRNGVTDLLRKSELEMKKYQQMDEELQKNKIEVTTKINEIINEISKQET
RKRDMSDNMILKEKGAAAVVLQREITELREKLGNMNYRQLLDHKKKLIDEEELLIREKNL
EQGGQDEMERNIKQLKRELNKEVYRLALKNYIRKSAEVVVQEEAINDLVAYTTALDRAII
EFHEERMASVNRIILRLWTQIYKGKDTTAIQIHTDSTEGMGNKKRVYNYKVVQEKQKVTM
DMKGRCSAGQKVLASIIIRMALAETFAKNCGIFALDEPTTNLDVHNIKSLAQALVSIVNL
RSKQQKNFQLIVISHDEDFITQLGKVDKVGKVYELYRNEKGLTEVKELCIENNATFDDCS
QNGESSDEEDAADVERRTRKRKELAEERKNLLKGNSSVSPPRKKRNERE
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtaagaagattagggatttctggaatccgaaacttcggccctggcgatgat
gagaggggattacaaacaataaggttcagtcacccgttgactatgatttttggaccaaat
ggaaccgggaaaacaaccattattgaggccctaaaatatgcgagcacaggggattttccg
cctggctgtggtgcaaacaaccagaattcattcgtacacgatgctttgctgaccgacgaa
tgctccgtaaaaggtgtggtgatagctgagatgtgcgataccaaaggaaacatagtaacg
gtatcgcgaaggctattatctgttcaaaaaaagtttaagaaaggctgtaaagtcttggac
actactctgtctacgcagaacataaaaacgggagagaaagtatcgataagccatcgctgc
gccgatgtggatcttgaaatgggtttggctttgggagtgtcaaaacctattttaaatcac
gtaattttttgtcatcaagaagattcgacatggccattagaagatggaaaaaaactgaaa
gaaagattcgatcagatttttgactctgataaatacaacaaagcagtcgagagaattaga
aagtttaataacaagataaaaaacgatcttcgtgttactaaagctcagagagagtcgttg
gaaattttgcttgaagaatctaaccagaagaaaaagagcttggaaaagtatgaaactcga
ctggtaaagtctattcaaaaagtttctgaagttgttgaaaaaatgaagcctcttaatgag
aaaatgaacgaacttcgtgattctgaagcacattacatcaagttacatacggaaaaagaa
acaaaaaaaactgaatatggactgataaaacagcaaataatggaattgaaagagagcata
caagttcttcacgatgggacagcagaagaactgcaaaaagaaattgctgcatttgataat
acacgggttgaaatggaaagtgagatggaaatgctgaagaataaatcgagagatatgaac
aaagaggaaagcaagttaaaagtcactatcagcaataagcaattatcgattggaaagttg
aaagagcaggctcaagcgttggaaaaaaatatttcgctccgtaactgtaaacttagtcaa
atgcgaacagaatggggtctcgatgaagttggagaagaagtaacagagacagaagctgct
gttggtctcgaccaattgaaagataaattgactgagatggaacggaatatcaaggacata
gcgctcaagcatcaggctgttgaaaaaacattacaagaggaattggatgccctcagagat
cagaaatctaaactcgaatcaggaatggtcctgttcaaaaggcagatagccgagaaacga
acggagacaaggagaattcgtgcgcaaatagaggaagtgaacatgctagccagccaattg
gagttagtcgactctaaattgcaagaagcaaatacaaaacttgataccatggctgcaagt
tttgacgttgatgccgtgaaaaaaaatatagaagatgaaatcaaagagcgggatcagatg
gaattgagtttggataaattggatgaagaagtgaaattacttcagcaacaaagttcacta
catgctgaattggatctgctcagatcatctttggcggtaaaagaaaaggacattcagaag
ttgaaaaacaagcatcaggcgaacttgaagatgcttttgaaaaccgaagtattaccggaa
tcaaatttgaaacatactcttagtggaattcacgatagctttagtgaacaaatcaaacaa
ttgaaccaccaattgcagaaagagcaacgtgtgctgaccacacttgaaactacaaaaaaa
catcacgaacatgaaataaaggaaaaaaatagcgagcttgaggacattcaagataaaata
gccaccatgtgccatggtatagactacgaagaagttttgctacatgcaaagaaaaccgtg
caagatttgcaggattccaaaggaatgtatacttacaaaagtatagcgtacaaagattat
ataaagaaaacagattcctgctgtccgctctgtcaccgtaatttcgatagtcagcaggaa
attgaagaattcaaatctgagttgaacgaggaagtaaacaaatatcctaaccagttgaaa
acttgtgaagaaaagttgaaagttcagcaagagcggtacgattctttgctgcaattgaag
ccacttgtggacaaagttaaacaaatagaagaaaccaccttaaagaagttgagaaacgac
ttaattcaagtgaaacagaaattatcagagtctcacgcgcgagttgagaaactgcaacta
cagattgctgaacctgagagtaaactagcgcaatgcaaagacattgtctgtgatgtagca
cagtgggatcagtattctgcagaagtcgtaaaactgaatcaatctattgctcgagtcaaa
gctcgtctttctgacaaagtcggcgagaggtctatgcaagaagcacaaaccgagcaagag
ttgttgagaaaatctctcagcactatacgcaaaaggatcgaaaaactgcaatcatcatta
agcactcacaacgataaattacaacaggcaagagagtctagaaatagactggtcgaggag
caattgagaatgaagtctgaagtacagaaactacagcagctgcaggacaaattgaaagac
ttgcacgctgaagaagtatctctacaagaaaacgtgcagcaattgcaggtgcaattggga
cccgttaatcagaatctggcagccaaaaatgattcactccaaaaaataaagcgagagcac
cgagaatcgctggacaacgatcggagtgttgtatctcaaaaatcaaggagcctgcatgat
ttgaacactatccaatcgcaaattgataatagcatccgcaatggagtaacggacttgttg
aggaaatctgaattggaaatgaagaagtatcaacagatggatgaagaattgcaaaagaat
aaaattgaagttactacaaaaattaacgaaataattaacgaaatctcgaaacaagagacc
cgcaaacgcgacatgagcgacaacatgatattgaaggaaaagggcgcagcagccgtagtg
cttcagcgtgaaataacagagttacgagagaagttaggtaacatgaattatcgccagctg
ttagatcacaagaaaaaactaatagacgaggaagaacttctcattcgcgaaaaaaacctc
gaacaaggaggacaagacgaaatggagcgtaatattaaacagttgaaacgtgaattgaac
aaagaagtgtatagattggctcttaaaaattacatacgcaagtccgctgaagttgttgtg
caagaggaagcaataaacgacctcgtggcgtatactacagccttggatagggcaataatt
gagtttcacgaagaacgaatggcttcagtaaaccggattatactaagattgtggacgcaa
atctataagggtaaagatacgacggctattcagattcatacagattcaaccgaaggaatg
ggcaacaaaaaaagagtttacaattacaaagttgttcaagagaaacaaaaggtcaccatg
gacatgaagggacgttgcagtgcagggcaaaaggtacttgcgtcaatcatcataagaatg
gccttagctgaaacatttgctaaaaattgtggtatatttgcattagatgaaccgacaaca
aaccttgatgtgcataacataaaaagtctagctcaggcactggtttcaattgtgaatctt
cgttctaaacaacagaagaatttccaattgatcgttattagtcatgacgaagactttata
actcaactaggtaaagttgacaaagtcggaaaagtttacgaactttatcgaaatgagaaa
gggctgactgaggttaaagagttgtgcattgagaacaatgcaacatttgatgattgctct
caaaatggagaatcctcagatgaagaagatgccgcagacgtggaaaggcgtacacgtaaa
cgaaaagaacttgccgaagaaagaaaaaatttgctgaaaggcaattcgtccgttagtcct
ccacgcaagaagagaaatgagagagaatga
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