Neodiprion fabricii: 124175997
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Entry
124175997 CDS
T08986
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
nfb
Neodiprion fabricii
Pathway
nfb03013
Nucleocytoplasmic transport
nfb03015
mRNA surveillance pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124175997
09122 Translation
03013 Nucleocytoplasmic transport
124175997
03015 mRNA surveillance pathway
124175997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124175997
03041 Spliceosome [BR:
nfb03041
]
124175997
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124175997
TREX complex
124175997
Spliceosome [BR:
nfb03041
]
Complex C
Other components
EJC/TREX
124175997
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124175997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
BspA_v
Btz
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124175997
NCBI-ProteinID:
XP_046412705
LinkDB
All DBs
Position
2:complement(35856271..35859639)
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AA seq
249 aa
AA seq
DB search
MKMVDKIEMSLDDIIKQNKGGRTRGSGRRGRGTASPRRGIRGASRAGGGVMRGRSRGGIG
RSAVPYTRGDVNSAWKHDMFDGVKKVGRGAVGGTGTTKLLVSNLDFGVSDSDIQELFSEF
GPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQVATSELPVTS
SIRGSRLSGGSFVQRAQPRFRGARGASSNRGRGTGGRRGGTRGGGRTPAKTPTAEELDAE
LEAYVKEVK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggtagacaaaatagaaatgagtctggatgacattatcaagcagaacaaaggt
ggaagaacccggggcagcggacgtcgtggacgcggaacagcttcgccgagacgtggtatc
cgaggtgcgtcgcgagccggcggtggagtgatgcgcggccgaagccgaggaggaattggc
cgctcagccgttccatacacccggggagatgtgaacagtgcttggaaacatgacatgttt
gatggagtgaagaaagttggacgaggtgcagttggtggtacaggcacaaccaaactactt
gtttcgaatttagattttggggtgtccgattcagatattcaggaattattcagtgagttt
ggcccattgaaatcagctgctgtacactatgacagatctggtcgatcgcttggctcagca
gatgttatatttgaaagaagagcagatgccattaaagcaatgaaacagtacaatggcgtg
cctcttgatggtcgagagatgaatattcaagtagcaacttcagaacttccagtaacctca
tctatccgaggaagtagactcagtggtggtagcttcgtacaaagagcccaaccgcgcttc
agaggagctcgtggagctagttccaaccgaggtcgtggaaccggtggtcgacgtggtgga
actagaggaggtggacggacgccagccaaaactccaactgcagaagagttggatgcagaa
ttagaagcatacgttaaggaagtgaagtaa
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