Neodiprion fabricii: 124176233
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Entry
124176233 CDS
T08986
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124176233
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124176233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
124176233
NCBI-ProteinID:
XP_046413162
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All DBs
Position
2:complement(33971859..33977553)
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AA seq
1028 aa
AA seq
DB search
MDDSFFQWREGDRPSSKGDLPFRSFEVPDSEDESNVTNRSNAQGYCVLESSGDDDTNDLQ
DSRSSLETRNKNRRNTNRLTNSSDCSITSSEGDPQISKDDVLDESSSDSDIPIWTKKRGA
KKIFDDTYEEIADSSETQDKQIRPISVTPDSSSPQESPSSENHCDHDDSVSVLEEDNYLL
SSSKSDEKKNSKSAFNGNGVLPWSLESNESTVSHSEQEEIVSGKAWPEEDDKNSINISDD
SDTTGTSNDSDVQHVDLVSDASVSSSCALNSNPENVATVLSLVKSEVGVGNIDPLVAQKR
AILTFNIEKVQNQLAKSKMVLHTLNIDLLPDKGEKLRRSIDTDETKLQKLSEELESLPKI
GTPKPSKPAQGYISSLQSLVKNPSGPMEIKPLGLKALATQEKEQALTVERLADLHGSLNA
RPSEDEQAQDPKGLKISLMPHQRHALAWLLWREKQKPPGGILADDMGLGKTLTMISLIMS
SLKDVNSDNDEDDDDTWLQRKKTIQPYGGTLVVCPASLLSQWETEIKTRVKRGILAVELY
HGTNRETVPRRLARNDVVITTYNLISRDYKVNADSILYKINWKRVILDEAHIVRNHKSQQ
SEAVCHLSGRYRWALTGTPIQNKELDLYALLKFLKCSPFDDLRVWKRWVDNKNAAGQERL
ATVMKTLMLRRTKVELQAKGGLGSLPDKNLDEIRIKLDPEEQLVYEKVLVFSRSLFAQFL
HQRAEKNHMYEMHSGKFDNPSFLKTPKDTQFTKVQNELLARHADVKAHEILVLLLRLRQV
CCHPALIHAMLDQEDLTVNDIVDEKPESIDVMSRLGGLKLEDDENIDPNEIGVDRRVVQN
LLTTNNPVFNPSRQSSKLRAVLHTIQEILDKGDKMIVVSQWTSMLEVVRSHLKTLNGATY
DILSGKIPVKNRQRIVESFNTIDSAPQILLLSLTAGGVGLNLVGGNHLLLLDIHWNPQLE
AQAQDRIYRVGQTKSVYIYKFMCLDTVEQRIKALQDRKLEIANGVLTGAGTAAASKLSMD
DLKSLFSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagcttttttcagtggcgagaaggtgatagaccttcatctaaaggtgatttg
ccattccggtcttttgaggttccggatagcgaagatgagagcaacgtcacgaacagaagc
aacgcacaagggtattgtgttctcgaatctagcggcgacgacgatacaaacgatctccaa
gactcaagatcgtccttggaaaccaggaataagaatcgacgtaacaccaatcgtttaact
aacagctcagattgttcaatcacatccagtgaaggtgacccccagatcagcaaagatgat
gtacttgatgaaagtagttcagattcagacataccaatttggacaaagaagcgtggtgca
aaaaaaatatttgatgatacctatgaagaaatagcagactcgtctgaaacacaagacaaa
cagattcggcctatttctgtgactcctgacagctctagtccgcaagagagcccttcaagt
gaaaaccactgtgatcatgatgatagtgtgtccgtacttgaagaagacaattatttgtta
tcctcatctaaatctgatgaaaagaagaacagcaaatctgcatttaatgggaatggcgtt
ttgccatggtcccttgaatcaaacgaaagcacagtttcacactcggagcaagaagaaatt
gtcagtggtaaggcttggcctgaagaagacgataaaaattctataaatatttccgatgac
tcggacaccactggcacatctaatgattcggatgttcagcatgtcgaccttgtatctgat
gcaagtgtaagcagctcgtgtgcactaaattcaaatccggagaatgttgccacggttctc
tctcttgttaaaagtgaggtaggggttggcaacatagatccacttgttgcacaaaagcga
gccatactcacttttaatatagaaaaggttcagaatcaactggcaaagtccaagatggtg
cttcataccttaaacattgatttgctcccagataaaggtgaaaaattgagacggagtatt
gatactgatgaaacaaaactccaaaagttgtcagaagaattggaatctcttccaaagata
ggtacacccaagccctcgaaaccagcacaaggatacatttcttcccttcaatctttggtc
aaaaacccatctggtccaatggaaatcaaaccacttggcctaaaagctcttgcaacgcaa
gaaaaagagcaagccttaactgtagagaggctggcagatcttcacggatcattgaatgct
cgtccaagtgaagacgagcaagctcaagatccaaaaggtctaaaaatttccctgatgccg
catcaacgacatgctctcgcatggcttctttggagagagaagcaaaaaccccctggtgga
attttagctgatgatatgggtctgggaaaaacattgacaatgatttctctaattatgtca
tctttaaaggatgtaaattcagataatgatgaagacgatgatgacacgtggctacaacgt
aaaaagactatccaaccttatggtggtactttggtggtgtgccctgcctcgctactttct
caatgggaaactgaaataaaaacacgtgtgaaacggggtatactagctgttgaattgtat
catggaactaacagagaaactgtaccaagacgtttggctaggaatgatgtagttatcacg
acttacaatttaattagcagagattataaggttaatgctgactccatcctctacaagatc
aactggaaaagagttattcttgacgaggctcacatagtacgtaatcataaaagccagcaa
tcagaagcggtatgccatctgtctgggcgttatcgttgggctttaactggtacacctata
caaaacaaggagttggatctttatgctcttttgaagtttctgaaatgttcaccatttgat
gacctgcgtgtctggaagcgatgggtagataataagaatgctgctgggcaggaaagatta
gctactgtcatgaaaactctgatgctacgcagaactaaagtcgaattacaggctaaaggt
ggccttggttctttgccagataaaaatctggatgaaattcgcattaaactggatcctgaa
gagcagctggtgtatgaaaaagttttggtattttcacgtagcctctttgcgcagttttta
catcagagagctgagaaaaatcacatgtatgaaatgcattccggaaagtttgataaccca
tcatttcttaaaacgccaaaggatacacaattcacgaaagtacaaaatgagctgttggca
aggcacgccgatgtcaaagctcatgagattttagttctcctactaagattaaggcaggtc
tgctgtcaccctgcgctgatacacgccatgttggatcaagaggacctgacagtaaatgat
attgttgatgaaaaacctgaaagtattgatgtaatgtctagacttggaggtttaaaactt
gaagatgatgaaaatattgatccgaatgagattggtgtcgatcggagagtggtgcaaaat
ttactcaccacaaacaatcccgtttttaatccgtcacgacaaagctccaaattgagagct
gtactccacacaatacaagaaatactggataaaggtgataagatgatagtagtatcacaa
tggaccagtatgctggaagttgtgaggtctcatcttaaaaccctaaatggagcaacttat
gatatcctgtctggaaaaattcccgtaaaaaatcggcagcgcatagtggagtcgttcaat
acaatagactcagcaccgcaaattctattactatcgcttactgcaggcggagtgggctta
aatttggttggcggcaatcacttacttttgcttgatatccattggaatccgcaattggaa
gcgcaagcacaggatcgaatttacagagttggccaaactaaaagcgtttacatttacaaa
tttatgtgtctggacactgtagagcagaggattaaagcactgcaagacagaaagctagaa
atagcaaacggagttttgacaggagcaggtactgcagctgcctccaagttatcgatggat
gatctcaaatctttgttcagcttgtaa
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