Neodiprion fabricii: 124176423
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Entry
124176423 CDS
T08986
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124176423
09123 Folding, sorting and degradation
03018 RNA degradation
124176423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124176423
03041 Spliceosome [BR:
nfb03041
]
124176423
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124176423
mRNA degradation factors
5'-3' decay
Lsm complex
124176423
Spliceosome [BR:
nfb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124176423
Complex C
U2 snRNP components
124176423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
124176423
NCBI-ProteinID:
XP_046413656
LinkDB
All DBs
Position
2:34904162..34905710
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttattctactcgtttttcaaatctttggtcgggaaggacgtcgtagtggagttgaaa
aatgacctgagtatttgtggtaccttacactctgtggaccagtatctgaacatcaagctc
acagacatcagtgtgacggatccagataaatatcctcacatgttgtcagtgaaaaactgt
ttcattcgtggttctgtagtgaggtacgttcaacttcctggagacgaggttgatacacag
cttttgcaagatgctgcacggaaagaggcagctgtacaaacccgataa
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