Neodiprion fabricii: 124177124
Help
Entry
124177124 CDS
T08986
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124177124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124177124
Enzymes [BR:
nfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124177124
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124177124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124177124
NCBI-ProteinID:
XP_046415112
LinkDB
All DBs
Position
3:7834969..7844681
Genome browser
AA seq
1697 aa
AA seq
DB search
MYCHRKMYKQLKSGMTMSAKHLVLENLEFSMFTNEDIRNLSVTKISTPLSFNILGNPLKG
GLYDPVLGPVSEKSDPCGTCGGNITKCSGHFGHIDLPLPVVNPLFHKQLASIIKLTCLRC
FKLQVPEPMKLLLVAKIKLLDEGFVSGLSDLEQEVQSIIAAGGDDTGTVEFVKEVIEAHV
ERLHNRQRLNHIVPLLAEENRSNARNVNMQRWMHVENILRQFQYVPICIHCQDSIPKIST
FRNRIMTTKSANDELDASKIKRGIVRRLETVLMMPDQTQKYLRELWNTERDVLKIIMPCL
STVHTEYPTDILFFSIIPVLPPIVRPVNYVNGQLIEHPQSQVYKAIIQDCLVLRNIIQTI
QDGDTSKLPEEGRIVFEQIRGNSPSEKLHNAWQQLQANVDHLMDRDVNKTTESANCQGLK
QVIEKKEGVIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFALKLTYPVPVTPWNVA
ELRQMIINGPNVHPGAVLVEGEDGSTTRISASAAVQRESIAKRLLTTSVKATKFFNGVKI
VHRHLHNGDILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAH
FPQNELARSEGYNIANVSNQYLVPKDGTPLSGLIQDHMVSGVRLTLRGKFFSREDYMQLV
YCALSDIQGDITLLPPAIIKPKLLWSGKQLLSTVIINVTPRGKAKINLAASAKIGPKAWE
ARKPRRWKCGTEFSDPKTMSEAEVVIRNGELLTGVLDKIHYGATPYGLIHCVYELYGGTY
SSRMLSAFGKLFQAFLQRDGFTLGIEDILILSNADEERAKFIESCRKIGESTQKSVLELP
EDTPMTEVKSKIQESYLINSKFQAQIDRKYKTALDVYTNDINKTCLPAGLLKKFPDNNLQ
LMVQSGAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFAAYDPMPRAGGFIDGRF
MTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVSYDSTVRDSDGSLV
QLYYGEDGLDVPSSQFLKKEQLDFLVHNRNAIVEKELLSRLKEDLSTEHILKSGRKMQRW
MKKHGDPLQKRRNSEFTKFSEKNRLSDPKYNKINQVCGRSKGALRLMREWVNTDEETKES
YKCSRCPDPVFSKYKQDSNYGVLTERIEGLINDYISKRKVENSADISEDELRDLLSFKVM
KTLCQPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKT
PSMEIPFRPNLENLEKQSNELRLKLTRCTLSNVLRSIDVDGRLEIEPQRRMTYKLMIKFL
PHKSYKREYCVKRKYVLQATEYFFFKELFKEIKKAAQVPGALLYTEENKEPANDDQLDAD
DPESAPSSQTKGRLDFGEMHESSDEDEAAEDADATAARSLSRHQENQEYDDPDETSDDSD
ENEDEKMRDDKTVATESNRAEETEKSEFENLLAEKRKKLIVDMYPHAIEYDFDDKKYLSC
ELKFWLPLKMSKLDLSTIIRSVAEKVVLWETPQIKRAFTFQNLNNETVLKTDGINIVEMF
KYNEILDLNRLYSNDIYRISQTYGIEAANRVIVKEVKDVFKMYGITVDPRHLLLIADYMT
FDGTFQPLSRKGMENSASPLQQISFESSLTFLKNATLHNKRDDLVSPSSRLIIGQPCKSG
TGSFDLMHRMERYILGQ
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgtattgccatagaaaaatgtacaagcaattaaaatcaggcatgacaatgtctgcaaaa
catctggtcctagagaacctggaattttcaatgtttactaacgaggatattcgcaactta
agcgttacaaaaatcagcacacctttgtctttcaacattttgggcaatccactgaaaggc
ggactctatgacccggtgttaggtccagtgagcgaaaagtcagatccctgtggaacatgt
ggcggaaatataacaaaatgttcgggacactttggacacatagacttgccattgcctgtg
gtaaatccgttattccacaagcagctggctagcatcatcaaattgacttgcttgcgttgt
ttcaaactgcaagtaccagagcctatgaaactgttgttggtagctaagataaaactgttg
gatgaggggtttgtctcagggcttagtgatttggaacaagaagttcaatccattatagct
gccggcggcgatgatactggaacagttgaattcgttaaagaagttattgaggctcatgta
gagaggcttcataatcgtcagaggttaaatcacattgtgccccttcttgctgaagagaat
cgttctaatgcaagaaatgttaatatgcaaagatggatgcacgtcgaaaatatactcagg
caatttcaatatgtacctatctgcatacattgtcaagatagtatcccaaaaattagtacg
ttcagaaaccgaattatgactactaaatcagccaatgatgagctggatgcaagcaaaatt
aaacgaggaatcgttagacgactggaaactgttctgatgatgccagaccagacgcaaaag
tatttgcgtgagctctggaatacagaaagagatgtattgaaaataataatgccttgtttg
agtacagtgcatacggaatatccaacagacattctgttcttcagtataatacctgtactt
ccaccgatcgtaaggccagttaactacgtcaatggacaactgatagaacatcctcaatcc
caagtctataaagctattatacaggattgcttggtgctcaggaacattatacaaacaatt
caagatggagacacttcaaaacttcccgaagaaggccgaattgtttttgaacaaataagg
gggaattcgccgtcggaaaaacttcataatgcttggcagcagctccaagcaaatgtcgat
catctgatggatcgtgatgtaaataaaacgacggaatcagcaaactgccaggggctgaaa
caggtgattgagaagaaagagggtgtcattcgcatgcacatgatggggaaacgggtgaat
tttgcagcaagatcagtcatcactccagatcctaatttaaacatcgacgaaattggtatc
cccgaagcttttgctttgaagttgacgtacccagttccggtaacaccttggaatgttgcc
gaattacgacaaatgataattaacggaccaaacgtacatccaggggcagttttggtggag
ggtgaagatggctcaacaactcgtataagcgcgagtgcagctgtgcaaagagaatcaatt
gcaaaacgacttttgactacaagcgtcaaagcgaccaaattttttaatggcgtaaagata
gttcaccgtcatttgcacaatggagatatcttgcttttgaatcgtcaacctactttgcat
aagccaagtatcatggcccataaagccaggatattgaaaggggagaaaacgttgcgcctt
cactatgccaattgtaaagcttacaacgctgacttcgacggagatgaaatgaatgcgcat
tttccacaaaacgaacttgctcgaagtgaaggatacaatatagccaacgtttctaaccag
tacctcgtcccgaaagatggtacaccattaagcggtttgattcaagatcacatggtttct
ggagtacgtttgactctcagaggaaaattcttttcaagagaagactacatgcagttagtt
tactgcgcattatcagatattcagggtgatataacgctattaccacctgccattatcaaa
ccaaagttattgtggtcaggcaaacaattgttatcaacagtcataattaatgttacacca
cgtggcaaagcgaagattaatcttgcagctagcgcaaagattggcccaaaagcatgggaa
gctaggaagccgcgacgttggaaatgtggcaccgaattcagtgatccaaaaacaatgtca
gaagctgaagtagttatacgtaatggcgaactgctaaccggtgttctcgacaagattcat
tacggtgctacaccttatggcttgatacattgcgtatacgagctttacggtggtacatac
tcaagcaggatgctgagtgcgtttggaaaattattccaagcatttcttcagagagatggc
tttactttgggaatagaagatatcttaattctttcaaacgctgatgaagaacgtgcgaaa
ttcatcgagtcatgtagaaagataggtgaaagcacccagaaatcagtgcttgagttgcct
gaagacacaccgatgacagaagtcaaatcaaaaatacaagaatcctatttgataaattcc
aagttccaagcgcaaatcgatcgtaaatacaaaactgctctggatgtctatacgaatgac
ataaacaaaacatgcctgccagctggactcctcaaaaaatttccggataataatttgcaa
cttatggttcagtccggagcaaaaggttcgactgttaacaccatgcagatttcttgtcta
cttgggcaaatcgaattggaaggaaagagaccgccgcttatgatcagtggcaaaagtctt
ccctcttttgctgcttatgatccaatgccaagagcaggcggctttattgacggtcgtttt
atgacgggaatccaaccccaagagttcttcttccattgcatggcaggcagagaagggctg
attgatactgcggtgaaaaccagtagatctggatacttgcagaggtgtttaattaagcat
ttggaaggcttaacagtcagttacgactcaaccgttcgcgattctgacggcagtttagtt
cagttatattacggagaagatgggctcgatgtaccgagttctcaatttctgaaaaaagaa
caactggattttttggtccataatagaaacgcgattgttgaaaaggaattgctaagccgt
ctcaaagaggatttgagcactgagcacatcttgaaatcagggcggaaaatgcaaaggtgg
atgaagaaacatggtgatcctttacaaaagcggcgcaatagcgaatttaccaaattttcc
gaaaaaaatcgactaagtgatcccaagtataataagatcaatcaagtttgtggcagaagc
aagggtgcactacgtttgatgagagaatgggtaaatactgacgaagaaactaaggaaagt
tacaagtgctcacgatgccctgaccctgtattttcaaaatacaaacaggactctaactat
ggagttctaacggaaagaatagaaggcttgataaacgattatatctcaaaaagaaaagtc
gaaaactccgcagatatatccgaagatgaactcagagacctcttatcattcaaagtaatg
aagaccctttgccagccaggagagcccgtaggattactagcagcgcaatcaattggcgag
ccgtcaacgcagatgacgttgaatactttccattttgcgggacgtggtgaaatgaacgta
accctcggaattccaagattacgagaaatccttatgatggcctcgaagaatataaagaca
ccctcaatggaaattccgtttaggccgaatcttgaaaatctagaaaaacaatcgaacgaa
ttaagattaaagttaaccagatgcactttgtcaaacgtcttaagaagcattgatgtagat
ggaagattagaaatcgaacctcagagaaggatgacttataagctgatgataaaattctta
cctcacaaaagctacaaacgagaatactgtgtgaaacgcaagtacgttttacaggcaacg
gaatatttcttcttcaaagaactgtttaaggaaataaaaaaggcagctcaagtacccgga
gcattgctgtacactgaggagaacaaggaaccagcgaacgacgatcaactagacgcagat
gaccctgaaagtgcgcctagcagtcagactaaagggagattagatttcggagaaatgcat
gaatcttctgatgaagatgaagctgccgaagacgcagatgcgaccgcagctaggtcactt
tctagacaccaagaaaatcaggaatatgacgaccctgacgaaacaagtgatgactccgac
gaaaacgaagacgagaaaatgcgagatgacaaaactgtggcaactgaatcaaacagagct
gaagagacagagaagagtgagttcgaaaatctgcttgcagagaaaaggaaaaaactaatt
gtcgacatgtacccccatgctattgagtacgattttgatgacaagaaatatttatcatgc
gaattaaagttctggctacctttgaaaatgtcaaaactggacttatctacgatcattaga
tcagtcgcagaaaaggtcgtactatgggaaacgcctcagataaagcgagcatttacattc
caaaatctgaataatgaaactgttctgaaaactgatggaataaacattgtggaaatgttc
aagtacaatgaaatcctagatctcaacagattatactctaatgacatatacaggatttcg
caaacctacggcatcgaagcagcaaatagagttatagtaaaggaagtgaaggatgtgttt
aaaatgtacggaattactgttgatccacgacatttacttctgatcgccgactacatgact
tttgacggaactttccaaccgctaagtcgtaaaggaatggagaactctgcatctcccctc
cagcaaattagttttgagagttcactcaccttcctgaaaaatgctacgctccataacaaa
cgagatgaccttgtttcaccatccagtcgcttgattatcggtcaaccttgcaaatccgga
acaggatcatttgatttgatgcatagaatggaaaggtacattctgggtcagtga
DBGET
integrated database retrieval system
