Neodiprion fabricii: 124177203
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Entry
124177203 CDS
T08986
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfb03036
]
124177203
Chromosome and associated proteins [BR:
nfb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124177203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124177203
NCBI-ProteinID:
XP_046415296
LinkDB
All DBs
Position
3:23217920..23234202
Genome browser
AA seq
1387 aa
AA seq
DB search
MPRPKRTSTKRYKAEEVSEDSSAGSGSDFDDDEDPDKIEVPGGGKDLATAAGIGGIKEEK
PLVPAPLLKGHGGVSTFVEPSPLLNQKFANKLPGGLVTKSNAAPGYEMLRVGGSQGTPAF
MGVGGMGPVGQMAANNPYAFPPSLASLAGYNPAALFQHSKSPSAMEMSNMMGMGSLMGLG
SMAGLNPFMLQQFLTQNGMHPNWSGGLSGKAVSQLWMNSGDPGKMNMQPTLPEEEEVDDE
DMGVAETYADYMPTKLKLGRKHPDPVVETASLSSVEPTDVWYKVVIPEEIIRSGALSALQ
LESITYASQQHEHLLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYLRGRKRAIWVSVSND
LKYDAERDLKDIGAGKIEVHPLNKFKYAKISSAVNSNVKKGVIFSTYSALIGESSQSGGK
YKSRLKQLLQWCGEDFDGLIVFDECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVY
ASATGASEPRNMAYMVRCGMWGEGTPFPEFTDFIAAVEKRGVGAMEIVAMDMKLRGMYIA
RQLSFHGVAFKIEEVPLSKEFTKVYDTSVKLWVEAMQKFQEAAELIDAENRMKKTMWGQF
WSSHQRFFKYLCIAAKVKHAVAVAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDF
VSTAKGVLQTLVEKHFPAPDRNRIHRLLGLEPPKSGKSHNGDFEEAGGSTGKRKPVRQAA
QRASKKVKTWSTDDDVSEDDRNGGGRSSGSEFKLSGTESEDDNRSDDESNASSDFNPFYS
DSDSDADPWDRRKKKGKKHKKSPKKRLSTQDKIQSMLASKTSHNKNKRNGESGMGMPGMG
LSMSQAPPRDAIERACCIKEELLAQIESLGDKLPPNTLDQLIDELGGPENVAEMTGRKGR
VVQTEDGAIQYESRSEVDVPLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARN
QMRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESL
GALTHGDRRATETRDLSQFNIDNKYGRAALEATMKTIMGYESPLVPPPQDYKGDFFKDVA
DALVGVGLICNSESMPGVLTLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIVTQ
AKKTGRFDMGILDLGTSGENVKRVKLYRFLRKHATGIAPTELHIVHVERGMSWAEAMDRW
ESLTGSKEGFYLSHQVRNGKQTAILAVAVESGKKKGENRKDHLYTVYRPNTGLQLRQETL
GELEKKYKKVETEEAEPHWTQQYDASVDTCSHAYWRGNCKNTTLGLDCEVGLRRRSYNVL
AGSVLSVWSRVENVLATRSGHNSKMQVVRLRTDESLKIVGTLIPKSCMEALREALSSDAE
KTEEQTF
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggccgaaacgaacctcgacaaagaggtataaagctgaagaagtcagcgaagac
agcagtgcaggtagtggcagtgattttgatgacgatgaggatccagataaaatagaagta
ccaggtggtggaaaagatctggcgacagctgcaggcattggcggaattaaagaggagaaa
ccattggttccagctcccttgctcaagggacatggtggagttagcacattcgtggaaccc
tcgccattactcaaccaaaaatttgcaaataaactaccggggggtctagttacaaaaagc
aacgccgctccaggctacgagatgcttcgtgtcggtgggtctcaggggacaccggccttc
atgggtgtaggtggaatggggccggttggacaaatggctgctaataatccctatgcattt
ccaccgagtcttgctagtttagcaggttacaatcccgctgccctttttcaacatagtaag
tcaccttctgcaatggaaatgagcaatatgatgggaatgggtagtttaatgggccttgga
tctatggctggtctaaacccatttatgctgcaacaattcctaacccaaaacggaatgcat
ccaaattggtctggaggattgtcaggtaaagccgtatctcaattgtggatgaattccggt
gatccgggaaaaatgaacatgcagccgacactgccagaagaagaagaagtggatgatgaa
gatatgggtgttgcagaaacctacgcagattacatgccaacaaaattaaaactaggccga
aagcatcctgatcctgttgtggaaaccgcttcattatctagcgtggagccgacagatgtg
tggtataaagttgtcatccctgaagagattattcggtccggcgccttgtccgcgttgcaa
ttagaatcgataacatatgcatcgcagcagcacgagcacttattaccagatggtacaaga
gctggttttctcataggagatggagctggagtaggaaaaggtcgaacaatagctggaata
atatttgaaaattatttaagaggtagaaaacgggcgatctgggtatctgtttctaatgat
ttgaaatatgatgctgaacgagacttgaaagacataggcgcaggaaaaattgaagtgcat
ccattgaataaatttaaatatgcgaagatatcgtcggccgtgaattcaaacgttaagaaa
ggtgttatattcagtacttactcagccctcatcggcgaatcttctcaaagtgggggtaaa
tacaaaagccgactgaagcagctattacagtggtgtggcgaagactttgatgggttaatt
gtgtttgatgagtgtcacagagcgaaaaatctctgtcctactggtagttcaaaaccaaca
aaaactggccttacggtattagaacttcaaaacaaattgcctaaggcacgtgttgtatac
gcttccgcgacgggtgcgtcggaaccaaggaatatggcttacatggtgagatgtggtatg
tggggggaagggacaccttttccggaattcactgacttcatcgctgctgtagaaaaaaga
ggtgttggcgctatggaaattgtagctatggacatgaagctgagaggaatgtatatagcc
agacagctcagctttcacggtgtggcattcaaaattgaagaagttcctttatccaaagaa
tttacaaaagtgtacgacacttctgtgaaactgtgggttgaagctatgcagaaatttcaa
gaggctgctgaacttattgatgccgaaaacaggatgaaaaaaacaatgtggggacaattc
tggtcttcgcatcaaagatttttcaagtatctttgtatagctgctaaagttaaacatgcg
gtagcagttgctcgtgaagcagtgaaatgtggcaaatgtgtcgtgataggtctacaatct
actggagaagcccgtaccttagaacaactagagagagatgatggagaactcagtgacttt
gtctcaacagccaagggagttcttcaaactctggtggaaaaacacttcccagcacctgat
cgaaatcgaatacatcgattgcttggtcttgagccaccgaaatccggcaaatctcataat
ggggactttgaggaagcaggaggttcaacaggaaaacgcaaaccagtgcgtcaagctgca
cagagagcatcgaaaaaggttaagacatggtctaccgatgatgatgtgtctgaggatgac
agaaatggcggtggtcggagttctggatcggagtttaaactctctggaactgaaagtgaa
gatgataatcgtagcgacgatgaaagtaacgctagttctgactttaatcccttctacagt
gacagtgattctgatgcagatccgtgggaccggaggaaaaaaaaggggaagaagcacaaa
aaatcgccgaaaaaacgtctaagtacgcaagataaaattcagtcgatgcttgcaagtaaa
acatcacataacaaaaataaacggaacggtgagagtggtatgggaatgcctggaatgggc
ctgtcaatgtcgcaagctccaccacgtgatgctatagagcgtgcttgttgcattaaggaa
gaattactggctcagatcgaatctcttggtgacaaattacctccaaatacactggatcaa
cttatcgatgaattaggcggacctgaaaacgttgcagaaatgacaggcagaaaaggtcga
gttgtgcagactgaggatggtgcgattcagtatgaatctcggtcggaagtagatgttcca
ttagaaactttaaatttaacagaaaaacaaaggtttatggatggcgaaaaaacggtagcg
atcatctccgaggccgcgagcagtggtatttctctgcaaagcgataggcgggctagaaat
caaatgcgaagagtacatataactctagaactgccatggagtgccgacagagctatccaa
caatttggaagaactcatagatccaatcaagtcaatgctccagaatacatttttctaata
tccgacttagctggagaacgaaggttcgcttcaatcgtagcaaaacgtttagaaagcttg
ggggctttaacacacggtgatcgaagagctacagaaacaagagatttgtcacagttcaat
attgataacaaatatggtagggctgcattagaagccactatgaaaacaataatgggttat
gaaagcccactggttccaccaccgcaagattacaaaggagacttctttaaagacgttgca
gatgccttggttggggttggactaatttgtaacagtgagagcatgccaggcgtcttgacc
ttagacaaagattacaataatatgtccaaatttctgaacagaattttaggaatgcccgtc
gatttacaaaatagactttttaagtacttcaccgacacgttgaatgcgatagtgactcag
gcgaagaaaaccggtcgttttgatatggggattctcgatttgggtacatctggtgaaaat
gttaagagagtaaaattgtaccgatttttacggaaacacgcaaccggcattgcgccaacg
gagctacacatcgttcacgttgagagagggatgagctgggcagaagctatggatcggtgg
gaatctctaacaggatccaaagaaggcttttacctgagtcatcaggtcagaaacggaaag
cagacagctatattggctgtggcagtcgaaagtggcaagaaaaaaggtgaaaatagaaag
gaccatctttacacagtctacaggcctaatacgggtctgcagttgcgacaagagacgttg
ggtgaattagagaaaaagtacaaaaaggtggaaactgaagaagccgaaccacattggact
cagcagtatgacgcatcagtagacacatgttctcatgcatactggcggggaaattgcaaa
aataccacattgggactggattgtgaagttggattgcgtaggcgatcctacaatgtactt
gcaggatcggtgctgagcgtgtggagtcgagtagaaaatgtactagctacaagatctggc
cacaattcaaagatgcaggttgtgcgtttgagaactgatgagagcttaaaaatagtgggc
acgttaatcccaaaatcttgtatggaagcattgcgcgaagctctctcatcagatgctgaa
aaaactgaggagcaaacattctga
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